Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNEP1R1Q8N9A8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.33■□□□□ 0.36
CNEP1R1Q8N9A8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.33■□□□□ 0.36
CNEP1R1Q8N9A8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.33■□□□□ 0.36
CNEP1R1Q8N9A8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
CNEP1R1Q8N9A8 LINC01006-201ENST00000333319 2292 ntBASIC17.33■□□□□ 0.36
CNEP1R1Q8N9A8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CNEP1R1Q8N9A8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNEP1R1Q8N9A8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNEP1R1Q8N9A8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CNEP1R1Q8N9A8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNEP1R1Q8N9A8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 RBM17P1-201ENST00000453646 1190 ntBASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 AL157384.1-201ENST00000445995 2473 ntBASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNEP1R1Q8N9A8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 MMP23A-201ENST00000234610 1017 ntBASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 AP000525.1-201ENST00000608286 694 ntBASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 AL445675.2-201ENST00000620291 557 ntBASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 AC131212.4-201ENST00000623606 975 ntBASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNEP1R1Q8N9A8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 MIR1238-201ENST00000408483 83 ntBASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 AL162377.1-201ENST00000618844 1793 ntBASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms