Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 YBX1P10-201ENST00000444752 975 ntBASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 AC090192.1-201ENST00000517740 490 ntBASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 AC142086.2-201ENST00000569753 217 ntBASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL3Q8IVW4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 AC120498.8-201ENST00000614275 531 ntBASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 AC087289.5-201ENST00000586076 3175 ntBASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL3Q8IVW4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
CDKL3Q8IVW4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDKL3Q8IVW4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.01■□□□□ 0.79
CDKL3Q8IVW4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL3Q8IVW4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL3Q8IVW4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL3Q8IVW4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL3Q8IVW4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL3Q8IVW4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL3Q8IVW4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL3Q8IVW4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL3Q8IVW4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDKL3Q8IVW4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDKL3Q8IVW4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20■□□□□ 0.79
CDKL3Q8IVW4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDKL3Q8IVW4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.99■□□□□ 0.79
CDKL3Q8IVW4 ZNF815P-204ENST00000434898 1737 ntBASIC19.99■□□□□ 0.79
CDKL3Q8IVW4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDKL3Q8IVW4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKL3Q8IVW4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKL3Q8IVW4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CDKL3Q8IVW4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKL3Q8IVW4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms