Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 KRT18P68-201ENST00000392293 1000 ntBASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUDCD3Q8IVD9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 RARRES2P4-201ENST00000514074 484 ntBASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.34■□□□□ 0.69
NUDCD3Q8IVD9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUDCD3Q8IVD9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NUDCD3Q8IVD9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NUDCD3Q8IVD9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.33■□□□□ 0.69
NUDCD3Q8IVD9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.33■□□□□ 0.69
NUDCD3Q8IVD9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUDCD3Q8IVD9 AC007613.1-201ENST00000572811 2597 ntBASIC19.33■□□□□ 0.69
NUDCD3Q8IVD9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUDCD3Q8IVD9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 AC090340.1-201ENST00000620778 4980 ntBASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 AL049812.1-201ENST00000432563 2267 ntBASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms