Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC093787.1-201ENST00000450396 207 ntBASIC17.32■□□□□ 0.36
LRRC28Q86X40 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC28Q86X40 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC28Q86X40 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC28Q86X40 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC28Q86X40 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC28Q86X40 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRRC28Q86X40 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC28Q86X40 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC28Q86X40 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC28Q86X40 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC28Q86X40 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRRC28Q86X40 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC28Q86X40 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC28Q86X40 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LRRC28Q86X40 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC28Q86X40 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.31■□□□□ 0.36
LRRC28Q86X40 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC28Q86X40 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC28Q86X40 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC28Q86X40 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC28Q86X40 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.31■□□□□ 0.36
LRRC28Q86X40 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRRC28Q86X40 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC28Q86X40 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 AC010980.2-201ENST00000587099 1412 ntBASIC17.3■□□□□ 0.36
LRRC28Q86X40 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC28Q86X40 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC28Q86X40 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC28Q86X40 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC28Q86X40 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 AC007322.3-201ENST00000426526 701 ntBASIC17.3■□□□□ 0.36
LRRC28Q86X40 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC28Q86X40 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC28Q86X40 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC28Q86X40 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC28Q86X40 KRT8P36-201ENST00000489121 1440 ntBASIC17.3■□□□□ 0.36
LRRC28Q86X40 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LRRC28Q86X40 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 AC020763.4-201ENST00000623414 4170 ntBASIC17.29■□□□□ 0.36
LRRC28Q86X40 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 MIPEPP3-201ENST00000412105 444 ntBASIC17.29■□□□□ 0.36
LRRC28Q86X40 AC073210.2-201ENST00000430369 194 ntBASIC17.29■□□□□ 0.36
LRRC28Q86X40 AL138781.1-201ENST00000566567 1274 ntBASIC17.29■□□□□ 0.36
LRRC28Q86X40 MIR4758-201ENST00000577688 71 ntBASIC17.29■□□□□ 0.36
LRRC28Q86X40 AC100791.3-201ENST00000617619 330 ntBASIC17.29■□□□□ 0.36
LRRC28Q86X40 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC28Q86X40 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
LRRC28Q86X40 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms