Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 TREX1-205ENST00000625293 1783 ntBASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 AC093787.1-201ENST00000450396 207 ntBASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL55Q7Z7F7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 KRT17P1-201ENST00000399211 1546 ntBASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 AC133552.2-202ENST00000575694 574 ntBASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL55Q7Z7F7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL55Q7Z7F7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms