Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHMP1BQ7LBR1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP1BQ7LBR1 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP1BQ7LBR1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CHMP1BQ7LBR1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP1BQ7LBR1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP1BQ7LBR1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CHMP1BQ7LBR1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP1BQ7LBR1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CHMP1BQ7LBR1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 RN7SL471P-201ENST00000580476 299 ntBASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 PCDHAC2-203ENST00000615316 3011 ntBASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP1BQ7LBR1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 GCSHP5-201ENST00000443090 522 ntBASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 KRT8P17-201ENST00000453110 1448 ntBASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP1BQ7LBR1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 RPS2P52-201ENST00000469610 820 ntBASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP1BQ7LBR1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 KRT16P6-202ENST00000425692 1426 ntBASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 UBE2SP1-201ENST00000450587 669 ntBASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 AC098590.1-201ENST00000468126 897 ntBASIC17.92■□□□□ 0.46
CHMP1BQ7LBR1 RPPH1-201ENST00000516869 333 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms