Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 KRT8P45-201ENST00000414328 1447 ntBASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 AC012676.1-201ENST00000574705 1949 ntBASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.05■□□□□ 0.96
CNKSR3Q6P9H4 KRT8P41-201ENST00000533985 1514 ntBASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 VENTXP5-201ENST00000523979 775 ntBASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 AL136038.3-201ENST00000561909 1096 ntBASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.04■□□□□ 0.96
CNKSR3Q6P9H4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 LINC01465-201ENST00000408887 1940 ntBASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNKSR3Q6P9H4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 CLEC4GP1-201ENST00000596555 870 ntBASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CNKSR3Q6P9H4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.02■□□□□ 0.95
CNKSR3Q6P9H4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CNKSR3Q6P9H4 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.02■□□□□ 0.95
CNKSR3Q6P9H4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.02■□□□□ 0.95
CNKSR3Q6P9H4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 AC112907.2-201ENST00000448639 330 ntBASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
CNKSR3Q6P9H4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNKSR3Q6P9H4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms