Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 Z82202.1-201ENST00000623446 1880 ntBASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
DENND1BQ6P3S1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 AC007952.6-201ENST00000573168 2673 ntBASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 AC003957.1-201ENST00000625108 2673 ntBASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 AC133681.1-201ENST00000465482 601 ntBASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 RPPH1-201ENST00000516869 333 ntBASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 AC093484.2-201ENST00000580996 2166 ntBASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DENND1BQ6P3S1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DENND1BQ6P3S1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DENND1BQ6P3S1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
DENND1BQ6P3S1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.64■□□□□ 0.9
DENND1BQ6P3S1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
DENND1BQ6P3S1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.64■□□□□ 0.9
DENND1BQ6P3S1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
DENND1BQ6P3S1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 AC098590.1-201ENST00000468126 897 ntBASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.63■□□□□ 0.89
DENND1BQ6P3S1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 AC110285.5-201ENST00000611501 352 ntBASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 AL359736.2-201ENST00000621992 437 ntBASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.62■□□□□ 0.89
DENND1BQ6P3S1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DENND1BQ6P3S1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms