Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 MIR1238-201ENST00000408483 83 ntBASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 LINC01023-201ENST00000606054 436 ntBASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SWSAP1Q6NVH7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 KRT8P9-201ENST00000558927 1449 ntBASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 AL390955.1-201ENST00000428694 934 ntBASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SWSAP1Q6NVH7 LINC01465-201ENST00000408887 1940 ntBASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 AC130371.2-201ENST00000619443 611 ntBASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SWSAP1Q6NVH7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 PCDHAC2-203ENST00000615316 3011 ntBASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.73■■□□□ 1.07
SWSAP1Q6NVH7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.72■■□□□ 1.07
SWSAP1Q6NVH7 AC008040.2-201ENST00000461049 708 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms