Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 AC116562.4-201ENST00000641316 2276 ntBASIC20.32■□□□□ 0.84
TTC39BQ5VTQ0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 AL135905.2-201ENST00000584934 1404 ntBASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 MIR718-201ENST00000390190 70 ntBASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TTC39BQ5VTQ0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 YBX1P10-201ENST00000444752 975 ntBASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 AC008550.1-201ENST00000511500 884 ntBASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39BQ5VTQ0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 AL158211.5-201ENST00000623583 2518 ntBASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 AC093827.2-201ENST00000512654 315 ntBASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 RARRES2P10-201ENST00000564312 460 ntBASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39BQ5VTQ0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
TTC39BQ5VTQ0 AC087289.5-201ENST00000586076 3175 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms