Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 CNN2P11-201ENST00000429351 262 ntBASIC10.74□□□□□ -0.69
UBR4Q5T4S7 SAPCD2P3-201ENST00000455031 850 ntBASIC10.74□□□□□ -0.69
UBR4Q5T4S7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 MED15P5-201ENST00000423150 992 ntBASIC10.74□□□□□ -0.69
UBR4Q5T4S7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 AC131212.4-201ENST00000623606 975 ntBASIC10.74□□□□□ -0.69
UBR4Q5T4S7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC10.74□□□□□ -0.69
UBR4Q5T4S7 MIR770-201ENST00000390219 98 ntBASIC10.73□□□□□ -0.69
UBR4Q5T4S7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 RPS2P1-201ENST00000434010 821 ntBASIC10.73□□□□□ -0.69
UBR4Q5T4S7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 AC034105.1-201ENST00000563488 319 ntBASIC10.73□□□□□ -0.69
UBR4Q5T4S7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC10.73□□□□□ -0.69
UBR4Q5T4S7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 ATP5G2P4-201ENST00000442175 420 ntBASIC10.72□□□□□ -0.69
UBR4Q5T4S7 Z85996.1-201ENST00000494644 937 ntBASIC10.72□□□□□ -0.69
UBR4Q5T4S7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 MIR4674-201ENST00000582457 87 ntBASIC10.72□□□□□ -0.69
UBR4Q5T4S7 AC116407.3-201ENST00000623905 1129 ntBASIC10.72□□□□□ -0.69
UBR4Q5T4S7 CASP16P-204ENST00000635032 809 ntBASIC10.72□□□□□ -0.69
UBR4Q5T4S7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 AC093909.1-201ENST00000504731 1122 ntBASIC10.72□□□□□ -0.69
UBR4Q5T4S7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 AL356652.1-201ENST00000615962 565 ntBASIC10.72□□□□□ -0.69
UBR4Q5T4S7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBR4Q5T4S7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms