Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.73■□□□□ 0.59
PDCD4Q53EL6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDCD4Q53EL6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 AC007322.1-201ENST00000426983 750 ntBASIC18.71■□□□□ 0.59
PDCD4Q53EL6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 BID-214ENST00000617586 542 ntTSL 5 BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 NEFHP1-201ENST00000412845 2629 ntBASIC18.71■□□□□ 0.59
PDCD4Q53EL6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDCD4Q53EL6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 AL512625.2-201ENST00000417533 625 ntBASIC18.7■□□□□ 0.58
PDCD4Q53EL6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 AL161938.1-201ENST00000569833 2180 ntBASIC18.7■□□□□ 0.58
PDCD4Q53EL6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 CROCCP3-202ENST00000420820 1947 ntBASIC18.7■□□□□ 0.58
PDCD4Q53EL6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.7■□□□□ 0.58
PDCD4Q53EL6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.69■□□□□ 0.58
PDCD4Q53EL6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms