Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RASGEF1BQ0VAM2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RASGEF1BQ0VAM2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.71■□□□□ 0.43
RASGEF1BQ0VAM2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RASGEF1BQ0VAM2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RASGEF1BQ0VAM2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RASGEF1BQ0VAM2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.71■□□□□ 0.43
RASGEF1BQ0VAM2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RASGEF1BQ0VAM2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
RASGEF1BQ0VAM2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.71■□□□□ 0.43
RASGEF1BQ0VAM2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RASGEF1BQ0VAM2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 AL121906.2-201ENST00000621597 723 ntBASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RASGEF1BQ0VAM2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 AC233263.1-201ENST00000578059 224 ntBASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 AL121829.2-201ENST00000620908 328 ntBASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 AC125437.2-201ENST00000625180 2167 ntBASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RASGEF1BQ0VAM2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 PRKY-204ENST00000533551 1019 ntBASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 PHGDH-210ENST00000641115 1638 ntBASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 AC116562.4-201ENST00000641316 2276 ntBASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RASGEF1BQ0VAM2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 PRORSD1P-201ENST00000295112 541 ntBASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.67■□□□□ 0.42
RASGEF1BQ0VAM2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms