Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AL160286.2-201ENST00000567150 934 ntBASIC20.7■□□□□ 0.9
UBE3AQ05086 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.7■□□□□ 0.9
UBE3AQ05086 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE3AQ05086 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.7■□□□□ 0.9
UBE3AQ05086 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
UBE3AQ05086 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.7■□□□□ 0.9
UBE3AQ05086 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE3AQ05086 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.7■□□□□ 0.9
UBE3AQ05086 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
UBE3AQ05086 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE3AQ05086 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
UBE3AQ05086 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE3AQ05086 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.69■□□□□ 0.9
UBE3AQ05086 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
UBE3AQ05086 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.69■□□□□ 0.9
UBE3AQ05086 AC140113.3-201ENST00000605663 199 ntBASIC20.69■□□□□ 0.9
UBE3AQ05086 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.69■□□□□ 0.9
UBE3AQ05086 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBE3AQ05086 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE3AQ05086 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE3AQ05086 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBE3AQ05086 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.68■□□□□ 0.9
UBE3AQ05086 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.68■□□□□ 0.9
UBE3AQ05086 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.68■□□□□ 0.9
UBE3AQ05086 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.68■□□□□ 0.9
UBE3AQ05086 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.68■□□□□ 0.9
UBE3AQ05086 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.68■□□□□ 0.9
UBE3AQ05086 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
UBE3AQ05086 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
UBE3AQ05086 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 IER3-202ENST00000376377 1350 ntBASIC20.68■□□□□ 0.9
UBE3AQ05086 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
UBE3AQ05086 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3AQ05086 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3AQ05086 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.67■□□□□ 0.9
UBE3AQ05086 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3AQ05086 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3AQ05086 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3AQ05086 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3AQ05086 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3AQ05086 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3AQ05086 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3AQ05086 KRT18P48-201ENST00000434763 852 ntBASIC20.67■□□□□ 0.9
UBE3AQ05086 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.67■□□□□ 0.9
UBE3AQ05086 AC008622.2-201ENST00000617006 1229 ntBASIC20.67■□□□□ 0.9
UBE3AQ05086 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3AQ05086 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3AQ05086 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
UBE3AQ05086 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
UBE3AQ05086 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
UBE3AQ05086 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3AQ05086 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
UBE3AQ05086 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.66■□□□□ 0.9
UBE3AQ05086 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3AQ05086 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
UBE3AQ05086 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3AQ05086 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
UBE3AQ05086 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3AQ05086 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3AQ05086 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3AQ05086 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3AQ05086 AL671277.2-201ENST00000458060 996 ntBASIC20.66■□□□□ 0.9
UBE3AQ05086 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.66■□□□□ 0.9
UBE3AQ05086 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.66■□□□□ 0.9
UBE3AQ05086 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.66■□□□□ 0.9
UBE3AQ05086 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
UBE3AQ05086 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.66■□□□□ 0.9
UBE3AQ05086 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.66■□□□□ 0.9
UBE3AQ05086 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.66■□□□□ 0.9
UBE3AQ05086 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.66■□□□□ 0.9
UBE3AQ05086 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
UBE3AQ05086 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3AQ05086 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.66■□□□□ 0.9
UBE3AQ05086 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3AQ05086 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3AQ05086 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3AQ05086 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3AQ05086 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3AQ05086 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
UBE3AQ05086 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.65■□□□□ 0.9
UBE3AQ05086 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3AQ05086 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.65■□□□□ 0.9
UBE3AQ05086 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3AQ05086 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3AQ05086 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.65■□□□□ 0.9
UBE3AQ05086 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3AQ05086 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.65■□□□□ 0.9
UBE3AQ05086 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
UBE3AQ05086 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms