Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.24■□□□□ 0.83
IRX4P78413 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
IRX4P78413 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
IRX4P78413 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.23■□□□□ 0.83
IRX4P78413 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
IRX4P78413 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.23■□□□□ 0.83
IRX4P78413 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
IRX4P78413 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
IRX4P78413 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.23■□□□□ 0.83
IRX4P78413 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.23■□□□□ 0.83
IRX4P78413 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.23■□□□□ 0.83
IRX4P78413 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.23■□□□□ 0.83
IRX4P78413 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.23■□□□□ 0.83
IRX4P78413 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.23■□□□□ 0.83
IRX4P78413 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.23■□□□□ 0.83
IRX4P78413 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
IRX4P78413 AC006557.6-201ENST00000623071 864 ntBASIC20.23■□□□□ 0.83
IRX4P78413 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
IRX4P78413 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.23■□□□□ 0.83
IRX4P78413 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IRX4P78413 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
IRX4P78413 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
IRX4P78413 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
IRX4P78413 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.22■□□□□ 0.83
IRX4P78413 PRKY-204ENST00000533551 1019 ntBASIC20.22■□□□□ 0.83
IRX4P78413 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.22■□□□□ 0.83
IRX4P78413 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
IRX4P78413 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.22■□□□□ 0.83
IRX4P78413 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.22■□□□□ 0.83
IRX4P78413 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.22■□□□□ 0.83
IRX4P78413 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX4P78413 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
IRX4P78413 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
IRX4P78413 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.21■□□□□ 0.83
IRX4P78413 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.21■□□□□ 0.83
IRX4P78413 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
IRX4P78413 AL445228.2-201ENST00000605589 952 ntBASIC20.21■□□□□ 0.83
IRX4P78413 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
IRX4P78413 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.21■□□□□ 0.83
IRX4P78413 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.21■□□□□ 0.83
IRX4P78413 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.21■□□□□ 0.83
IRX4P78413 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX4P78413 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
IRX4P78413 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.2■□□□□ 0.82
IRX4P78413 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IRX4P78413 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX4P78413 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.2■□□□□ 0.82
IRX4P78413 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IRX4P78413 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
IRX4P78413 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IRX4P78413 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.2■□□□□ 0.82
IRX4P78413 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.2■□□□□ 0.82
IRX4P78413 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms