Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB38P57729 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB38P57729 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB38P57729 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RAB38P57729 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB38P57729 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RAB38P57729 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB38P57729 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB38P57729 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB38P57729 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB38P57729 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB38P57729 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB38P57729 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB38P57729 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB38P57729 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAB38P57729 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB38P57729 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB38P57729 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB38P57729 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RAB38P57729 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
RAB38P57729 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.36■□□□□ 0.53
RAB38P57729 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB38P57729 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB38P57729 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB38P57729 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB38P57729 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB38P57729 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB38P57729 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB38P57729 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAB38P57729 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB38P57729 AL135905.2-201ENST00000584934 1404 ntBASIC18.35■□□□□ 0.53
RAB38P57729 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAB38P57729 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RAB38P57729 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.35■□□□□ 0.53
RAB38P57729 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB38P57729 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB38P57729 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB38P57729 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB38P57729 AL353708.3-201ENST00000610272 989 ntBASIC18.35■□□□□ 0.53
RAB38P57729 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB38P57729 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.35■□□□□ 0.53
RAB38P57729 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB38P57729 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RAB38P57729 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB38P57729 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB38P57729 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB38P57729 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB38P57729 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB38P57729 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB38P57729 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB38P57729 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB38P57729 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB38P57729 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RAB38P57729 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB38P57729 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAB38P57729 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB38P57729 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB38P57729 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB38P57729 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB38P57729 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB38P57729 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB38P57729 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB38P57729 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB38P57729 AP002982.1-201ENST00000492365 877 ntBASIC18.34■□□□□ 0.53
RAB38P57729 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB38P57729 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB38P57729 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB38P57729 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB38P57729 AP006294.2-201ENST00000641667 209 ntBASIC18.34■□□□□ 0.53
RAB38P57729 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RAB38P57729 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB38P57729 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB38P57729 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB38P57729 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB38P57729 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RAB38P57729 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB38P57729 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.33■□□□□ 0.53
RAB38P57729 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB38P57729 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms