Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.11■□□□□ 0.65
PKNOX1P55347 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKNOX1P55347 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PKNOX1P55347 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.11■□□□□ 0.65
PKNOX1P55347 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PKNOX1P55347 GPX1P1-201ENST00000388829 606 ntBASIC19.11■□□□□ 0.65
PKNOX1P55347 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PKNOX1P55347 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.11■□□□□ 0.65
PKNOX1P55347 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.11■□□□□ 0.65
PKNOX1P55347 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
PKNOX1P55347 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKNOX1P55347 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PKNOX1P55347 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKNOX1P55347 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.11■□□□□ 0.65
PKNOX1P55347 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKNOX1P55347 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKNOX1P55347 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.11■□□□□ 0.65
PKNOX1P55347 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKNOX1P55347 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PKNOX1P55347 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.1■□□□□ 0.65
PKNOX1P55347 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.1■□□□□ 0.65
PKNOX1P55347 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.1■□□□□ 0.65
PKNOX1P55347 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.1■□□□□ 0.65
PKNOX1P55347 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKNOX1P55347 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PKNOX1P55347 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.1■□□□□ 0.65
PKNOX1P55347 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.1■□□□□ 0.65
PKNOX1P55347 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.1■□□□□ 0.65
PKNOX1P55347 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.1■□□□□ 0.65
PKNOX1P55347 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PKNOX1P55347 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKNOX1P55347 AC080038.1-201ENST00000611274 1154 ntBASIC19.1■□□□□ 0.65
PKNOX1P55347 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PKNOX1P55347 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
PKNOX1P55347 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PKNOX1P55347 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKNOX1P55347 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.1■□□□□ 0.65
PKNOX1P55347 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.1■□□□□ 0.65
PKNOX1P55347 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.1■□□□□ 0.65
PKNOX1P55347 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKNOX1P55347 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
PKNOX1P55347 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKNOX1P55347 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PKNOX1P55347 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PKNOX1P55347 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PKNOX1P55347 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.09■□□□□ 0.65
PKNOX1P55347 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.09■□□□□ 0.65
PKNOX1P55347 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.09■□□□□ 0.65
PKNOX1P55347 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.09■□□□□ 0.65
PKNOX1P55347 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
PKNOX1P55347 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.09■□□□□ 0.65
PKNOX1P55347 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 AIRN-201ENST00000601203 4374 ntBASIC19.09■□□□□ 0.65
PKNOX1P55347 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 MKRN4P-201ENST00000444706 1521 ntBASIC19.09■□□□□ 0.65
PKNOX1P55347 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.09■□□□□ 0.65
PKNOX1P55347 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.09■□□□□ 0.65
PKNOX1P55347 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PKNOX1P55347 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PKNOX1P55347 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.09■□□□□ 0.65
PKNOX1P55347 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PKNOX1P55347 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PKNOX1P55347 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PKNOX1P55347 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.08■□□□□ 0.65
PKNOX1P55347 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PKNOX1P55347 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PKNOX1P55347 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PKNOX1P55347 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.08■□□□□ 0.64
PKNOX1P55347 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PKNOX1P55347 AF201337.1-201ENST00000520239 748 ntBASIC19.08■□□□□ 0.64
PKNOX1P55347 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PKNOX1P55347 AC073111.5-205ENST00000641717 521 ntBASIC19.08■□□□□ 0.64
PKNOX1P55347 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PKNOX1P55347 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PKNOX1P55347 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PKNOX1P55347 AC018553.1-201ENST00000616682 1458 ntBASIC19.08■□□□□ 0.64
PKNOX1P55347 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PKNOX1P55347 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
PKNOX1P55347 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PKNOX1P55347 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PKNOX1P55347 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PKNOX1P55347 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.08■□□□□ 0.64
PKNOX1P55347 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
PKNOX1P55347 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PKNOX1P55347 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms