Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1LP55160 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1LP55160 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
NCKAP1LP55160 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1LP55160 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1LP55160 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1LP55160 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1LP55160 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1LP55160 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1LP55160 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1LP55160 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1LP55160 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.4■■□□□ 1.02
NCKAP1LP55160 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1LP55160 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1LP55160 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1LP55160 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.39■■□□□ 1.02
NCKAP1LP55160 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NCKAP1LP55160 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.39■■□□□ 1.02
NCKAP1LP55160 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NCKAP1LP55160 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.39■■□□□ 1.02
NCKAP1LP55160 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NCKAP1LP55160 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.39■■□□□ 1.01
NCKAP1LP55160 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.39■■□□□ 1.01
NCKAP1LP55160 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
NCKAP1LP55160 AP002982.1-201ENST00000492365 877 ntBASIC21.39■■□□□ 1.01
NCKAP1LP55160 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NCKAP1LP55160 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.39■■□□□ 1.01
NCKAP1LP55160 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.39■■□□□ 1.01
NCKAP1LP55160 AC066615.1-201ENST00000640911 628 ntBASIC21.39■■□□□ 1.01
NCKAP1LP55160 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NCKAP1LP55160 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.39■■□□□ 1.01
NCKAP1LP55160 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.39■■□□□ 1.01
NCKAP1LP55160 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NCKAP1LP55160 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.39■■□□□ 1.01
NCKAP1LP55160 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.39■■□□□ 1.01
NCKAP1LP55160 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.38■■□□□ 1.01
NCKAP1LP55160 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.38■■□□□ 1.01
NCKAP1LP55160 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.38■■□□□ 1.01
NCKAP1LP55160 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 RPS2P4-201ENST00000476944 856 ntBASIC21.38■■□□□ 1.01
NCKAP1LP55160 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.38■■□□□ 1.01
NCKAP1LP55160 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.38■■□□□ 1.01
NCKAP1LP55160 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.38■■□□□ 1.01
NCKAP1LP55160 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.38■■□□□ 1.01
NCKAP1LP55160 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.38■■□□□ 1.01
NCKAP1LP55160 AL445675.2-201ENST00000620291 557 ntBASIC21.38■■□□□ 1.01
NCKAP1LP55160 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.38■■□□□ 1.01
NCKAP1LP55160 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
NCKAP1LP55160 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.38■■□□□ 1.01
NCKAP1LP55160 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCKAP1LP55160 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCKAP1LP55160 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NCKAP1LP55160 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCKAP1LP55160 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
NCKAP1LP55160 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCKAP1LP55160 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.37■■□□□ 1.01
NCKAP1LP55160 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.37■■□□□ 1.01
NCKAP1LP55160 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.37■■□□□ 1.01
NCKAP1LP55160 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.37■■□□□ 1.01
NCKAP1LP55160 KSR1P1-201ENST00000446298 240 ntBASIC21.37■■□□□ 1.01
NCKAP1LP55160 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCKAP1LP55160 AC073195.1-201ENST00000607241 877 ntBASIC21.37■■□□□ 1.01
NCKAP1LP55160 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.37■■□□□ 1.01
NCKAP1LP55160 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.37■■□□□ 1.01
NCKAP1LP55160 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
NCKAP1LP55160 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
NCKAP1LP55160 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCKAP1LP55160 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
NCKAP1LP55160 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NCKAP1LP55160 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.36■■□□□ 1.01
NCKAP1LP55160 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
NCKAP1LP55160 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCKAP1LP55160 ZNF815P-204ENST00000434898 1737 ntBASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms