Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC4P55056 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC4P55056 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOC4P55056 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
APOC4P55056 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC4P55056 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC4P55056 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOC4P55056 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.3□□□□□ -0.12
APOC4P55056 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
APOC4P55056 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC4P55056 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC4P55056 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC4P55056 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC4P55056 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 AC009237.14-201ENST00000609975 1594 ntBASIC14.3□□□□□ -0.12
APOC4P55056 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
APOC4P55056 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOC4P55056 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC4P55056 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC4P55056 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC4P55056 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC4P55056 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 AL512408.1-201ENST00000569378 2000 ntBASIC14.29□□□□□ -0.12
APOC4P55056 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.29□□□□□ -0.12
APOC4P55056 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.29□□□□□ -0.12
APOC4P55056 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC4P55056 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC4P55056 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.29□□□□□ -0.12
APOC4P55056 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.29□□□□□ -0.12
APOC4P55056 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC4P55056 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC4P55056 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.29□□□□□ -0.12
APOC4P55056 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC4P55056 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
APOC4P55056 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
APOC4P55056 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC4P55056 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
APOC4P55056 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
APOC4P55056 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC4P55056 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.29□□□□□ -0.12
APOC4P55056 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOC4P55056 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC4P55056 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 MMP23A-201ENST00000234610 1017 ntBASIC14.28□□□□□ -0.12
APOC4P55056 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
APOC4P55056 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
APOC4P55056 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
APOC4P55056 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC4P55056 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC4P55056 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
APOC4P55056 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC4P55056 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC4P55056 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.28□□□□□ -0.12
APOC4P55056 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.28□□□□□ -0.12
APOC4P55056 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC4P55056 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC4P55056 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC4P55056 DGCR10-201ENST00000609839 495 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms