Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
HMGCS2P54868 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
HMGCS2P54868 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
HMGCS2P54868 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
HMGCS2P54868 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
HMGCS2P54868 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
HMGCS2P54868 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HMGCS2P54868 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HMGCS2P54868 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.57■■□□□ 1.2
HMGCS2P54868 AL353719.1-201ENST00000566847 864 ntBASIC22.57■■□□□ 1.2
HMGCS2P54868 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.57■■□□□ 1.2
HMGCS2P54868 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
HMGCS2P54868 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HMGCS2P54868 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.57■■□□□ 1.2
HMGCS2P54868 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HMGCS2P54868 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCS2P54868 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCS2P54868 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCS2P54868 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCS2P54868 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.56■■□□□ 1.2
HMGCS2P54868 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCS2P54868 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCS2P54868 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCS2P54868 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.56■■□□□ 1.2
HMGCS2P54868 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.56■■□□□ 1.2
HMGCS2P54868 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.56■■□□□ 1.2
HMGCS2P54868 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.56■■□□□ 1.2
HMGCS2P54868 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCS2P54868 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.56■■□□□ 1.2
HMGCS2P54868 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.56■■□□□ 1.2
HMGCS2P54868 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
HMGCS2P54868 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.56■■□□□ 1.2
HMGCS2P54868 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.56■■□□□ 1.2
HMGCS2P54868 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
HMGCS2P54868 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCS2P54868 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCS2P54868 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.55■■□□□ 1.2
HMGCS2P54868 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.55■■□□□ 1.2
HMGCS2P54868 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCS2P54868 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
HMGCS2P54868 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
HMGCS2P54868 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.55■■□□□ 1.2
HMGCS2P54868 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCS2P54868 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.55■■□□□ 1.2
HMGCS2P54868 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.55■■□□□ 1.2
HMGCS2P54868 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.55■■□□□ 1.2
HMGCS2P54868 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCS2P54868 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCS2P54868 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.55■■□□□ 1.2
HMGCS2P54868 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
HMGCS2P54868 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.54■■□□□ 1.2
HMGCS2P54868 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.54■■□□□ 1.2
HMGCS2P54868 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.54■■□□□ 1.2
HMGCS2P54868 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.54■■□□□ 1.2
HMGCS2P54868 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
HMGCS2P54868 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
HMGCS2P54868 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 AC020907.5-201ENST00000624372 1936 ntBASIC22.54■■□□□ 1.2
HMGCS2P54868 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.54■■□□□ 1.2
HMGCS2P54868 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCS2P54868 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.54■■□□□ 1.2
HMGCS2P54868 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCS2P54868 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCS2P54868 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCS2P54868 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCS2P54868 KRT8P41-201ENST00000533985 1514 ntBASIC22.53■■□□□ 1.2
HMGCS2P54868 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.53■■□□□ 1.2
HMGCS2P54868 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.53■■□□□ 1.2
HMGCS2P54868 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.53■■□□□ 1.2
HMGCS2P54868 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
HMGCS2P54868 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCS2P54868 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
HMGCS2P54868 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
HMGCS2P54868 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.52■■□□□ 1.2
HMGCS2P54868 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.52■■□□□ 1.2
HMGCS2P54868 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCS2P54868 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCS2P54868 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCS2P54868 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCS2P54868 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCS2P54868 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.52■■□□□ 1.2
HMGCS2P54868 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCS2P54868 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCS2P54868 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.52■■□□□ 1.2
HMGCS2P54868 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCS2P54868 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.52■■□□□ 1.2
HMGCS2P54868 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.52■■□□□ 1.2
HMGCS2P54868 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.52■■□□□ 1.2
HMGCS2P54868 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms