Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.85■□□□□ 0.93
RAD23BP54727 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAD23BP54727 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAD23BP54727 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RAD23BP54727 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
RAD23BP54727 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAD23BP54727 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAD23BP54727 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD23BP54727 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD23BP54727 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD23BP54727 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RAD23BP54727 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.84■□□□□ 0.93
RAD23BP54727 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD23BP54727 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD23BP54727 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD23BP54727 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.84■□□□□ 0.93
RAD23BP54727 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAD23BP54727 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.84■□□□□ 0.93
RAD23BP54727 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.84■□□□□ 0.93
RAD23BP54727 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.84■□□□□ 0.93
RAD23BP54727 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RAD23BP54727 AC142381.4-202ENST00000563973 229 ntBASIC20.84■□□□□ 0.93
RAD23BP54727 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RAD23BP54727 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.84■□□□□ 0.93
RAD23BP54727 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.84■□□□□ 0.93
RAD23BP54727 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
RAD23BP54727 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAD23BP54727 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.83■□□□□ 0.93
RAD23BP54727 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAD23BP54727 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAD23BP54727 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
RAD23BP54727 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RAD23BP54727 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAD23BP54727 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAD23BP54727 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RAD23BP54727 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAD23BP54727 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RAD23BP54727 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAD23BP54727 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.83■□□□□ 0.93
RAD23BP54727 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.83■□□□□ 0.93
RAD23BP54727 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAD23BP54727 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAD23BP54727 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAD23BP54727 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.83■□□□□ 0.92
RAD23BP54727 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAD23BP54727 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAD23BP54727 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAD23BP54727 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.83■□□□□ 0.92
RAD23BP54727 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAD23BP54727 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAD23BP54727 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAD23BP54727 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAD23BP54727 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.92
RAD23BP54727 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RAD23BP54727 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.82■□□□□ 0.92
RAD23BP54727 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAD23BP54727 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RAD23BP54727 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RAD23BP54727 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAD23BP54727 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAD23BP54727 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.82■□□□□ 0.92
RAD23BP54727 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAD23BP54727 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.82■□□□□ 0.92
RAD23BP54727 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
RAD23BP54727 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RAD23BP54727 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAD23BP54727 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.82■□□□□ 0.92
RAD23BP54727 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAD23BP54727 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RAD23BP54727 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
RAD23BP54727 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.82■□□□□ 0.92
RAD23BP54727 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.82■□□□□ 0.92
RAD23BP54727 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAD23BP54727 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RAD23BP54727 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAD23BP54727 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.82■□□□□ 0.92
RAD23BP54727 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RAD23BP54727 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAD23BP54727 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RAD23BP54727 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD23BP54727 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
RAD23BP54727 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RAD23BP54727 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RAD23BP54727 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD23BP54727 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RAD23BP54727 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD23BP54727 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD23BP54727 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD23BP54727 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAD23BP54727 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAD23BP54727 TUBB8P6-201ENST00000436895 1288 ntBASIC20.81■□□□□ 0.92
RAD23BP54727 AL158047.1-201ENST00000445918 881 ntBASIC20.81■□□□□ 0.92
RAD23BP54727 KRT16P5-201ENST00000455284 522 ntBASIC20.81■□□□□ 0.92
RAD23BP54727 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.81■□□□□ 0.92
RAD23BP54727 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.81■□□□□ 0.92
RAD23BP54727 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RAD23BP54727 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.81■□□□□ 0.92
RAD23BP54727 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.81■□□□□ 0.92
RAD23BP54727 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.81■□□□□ 0.92
RAD23BP54727 AC004264.1-201ENST00000608354 794 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms