Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.1■□□□□ 0.81
PMS2P54278 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.1■□□□□ 0.81
PMS2P54278 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.1■□□□□ 0.81
PMS2P54278 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.1■□□□□ 0.81
PMS2P54278 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.1■□□□□ 0.81
PMS2P54278 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PMS2P54278 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PMS2P54278 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.1■□□□□ 0.81
PMS2P54278 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PMS2P54278 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PMS2P54278 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PMS2P54278 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PMS2P54278 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
PMS2P54278 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PMS2P54278 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PMS2P54278 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.09■□□□□ 0.81
PMS2P54278 AC142086.2-201ENST00000569753 217 ntBASIC20.09■□□□□ 0.81
PMS2P54278 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
PMS2P54278 AL121832.2-201ENST00000610979 668 ntBASIC20.09■□□□□ 0.81
PMS2P54278 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.09■□□□□ 0.81
PMS2P54278 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.09■□□□□ 0.81
PMS2P54278 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PMS2P54278 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PMS2P54278 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.08■□□□□ 0.81
PMS2P54278 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PMS2P54278 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PMS2P54278 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.08■□□□□ 0.81
PMS2P54278 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PMS2P54278 AL049812.1-201ENST00000432563 2267 ntBASIC20.08■□□□□ 0.81
PMS2P54278 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.08■□□□□ 0.81
PMS2P54278 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PMS2P54278 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.08■□□□□ 0.81
PMS2P54278 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PMS2P54278 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.08■□□□□ 0.81
PMS2P54278 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PMS2P54278 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.08■□□□□ 0.81
PMS2P54278 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.08■□□□□ 0.81
PMS2P54278 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.08■□□□□ 0.81
PMS2P54278 AC231657.2-201ENST00000624556 255 ntBASIC20.08■□□□□ 0.81
PMS2P54278 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PMS2P54278 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PMS2P54278 AL161938.1-201ENST00000569833 2180 ntBASIC20.08■□□□□ 0.8
PMS2P54278 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PMS2P54278 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PMS2P54278 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.07■□□□□ 0.8
PMS2P54278 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.07■□□□□ 0.8
PMS2P54278 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PMS2P54278 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PMS2P54278 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 CD99P1-205ENST00000527459 561 ntBASIC20.07■□□□□ 0.8
PMS2P54278 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PMS2P54278 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PMS2P54278 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS2P54278 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
PMS2P54278 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.06■□□□□ 0.8
PMS2P54278 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS2P54278 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms