Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
SMSP52788 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.23■□□□□ 0.51
SMSP52788 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.23■□□□□ 0.51
SMSP52788 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.23■□□□□ 0.51
SMSP52788 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.23■□□□□ 0.51
SMSP52788 AC098818.2-201ENST00000564925 2320 ntBASIC18.23■□□□□ 0.51
SMSP52788 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.23■□□□□ 0.51
SMSP52788 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMSP52788 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.23■□□□□ 0.51
SMSP52788 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.23■□□□□ 0.51
SMSP52788 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMSP52788 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.23■□□□□ 0.51
SMSP52788 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMSP52788 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMSP52788 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.23■□□□□ 0.51
SMSP52788 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.23■□□□□ 0.51
SMSP52788 AC012618.2-201ENST00000428058 849 ntBASIC18.23■□□□□ 0.51
SMSP52788 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMSP52788 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.23■□□□□ 0.51
SMSP52788 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.23■□□□□ 0.51
SMSP52788 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.23■□□□□ 0.51
SMSP52788 AC233263.1-201ENST00000578059 224 ntBASIC18.23■□□□□ 0.51
SMSP52788 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMSP52788 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SMSP52788 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMSP52788 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.23■□□□□ 0.51
SMSP52788 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMSP52788 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMSP52788 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.23■□□□□ 0.51
SMSP52788 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SMSP52788 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SMSP52788 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMSP52788 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMSP52788 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMSP52788 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
SMSP52788 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMSP52788 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SMSP52788 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.22■□□□□ 0.51
SMSP52788 MIR1224-201ENST00000408193 85 ntBASIC18.22■□□□□ 0.51
SMSP52788 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.22■□□□□ 0.51
SMSP52788 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SMSP52788 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMSP52788 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMSP52788 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.22■□□□□ 0.51
SMSP52788 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMSP52788 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.22■□□□□ 0.51
SMSP52788 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.22■□□□□ 0.51
SMSP52788 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMSP52788 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMSP52788 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMSP52788 AC005332.7-201ENST00000614046 2005 ntBASIC18.22■□□□□ 0.51
SMSP52788 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SMSP52788 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.21■□□□□ 0.51
SMSP52788 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SMSP52788 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
SMSP52788 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SMSP52788 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.21■□□□□ 0.51
SMSP52788 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
SMSP52788 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.21■□□□□ 0.51
SMSP52788 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.21■□□□□ 0.51
SMSP52788 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SMSP52788 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMSP52788 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
SMSP52788 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.21■□□□□ 0.51
SMSP52788 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.21■□□□□ 0.51
SMSP52788 AL135905.2-201ENST00000584934 1404 ntBASIC18.21■□□□□ 0.51
SMSP52788 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMSP52788 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.21■□□□□ 0.51
SMSP52788 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
SMSP52788 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.21■□□□□ 0.51
SMSP52788 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMSP52788 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMSP52788 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMSP52788 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMSP52788 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SMSP52788 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMSP52788 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMSP52788 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.2■□□□□ 0.5
SMSP52788 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMSP52788 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.2■□□□□ 0.5
SMSP52788 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMSP52788 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMSP52788 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.2■□□□□ 0.5
SMSP52788 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMSP52788 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms