Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK3P51956 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
NEK3P51956 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NEK3P51956 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NEK3P51956 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK3P51956 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.1■□□□□ 0.81
NEK3P51956 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK3P51956 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK3P51956 PRKY-204ENST00000533551 1019 ntBASIC20.1■□□□□ 0.81
NEK3P51956 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK3P51956 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK3P51956 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.1■□□□□ 0.81
NEK3P51956 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NEK3P51956 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NEK3P51956 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.1■□□□□ 0.81
NEK3P51956 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
NEK3P51956 TREX1-205ENST00000625293 1783 ntBASIC20.1■□□□□ 0.81
NEK3P51956 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK3P51956 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK3P51956 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NEK3P51956 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEK3P51956 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NEK3P51956 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.09■□□□□ 0.81
NEK3P51956 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NEK3P51956 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
NEK3P51956 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.09■□□□□ 0.81
NEK3P51956 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NEK3P51956 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.09■□□□□ 0.81
NEK3P51956 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NEK3P51956 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.09■□□□□ 0.81
NEK3P51956 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK3P51956 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.09■□□□□ 0.81
NEK3P51956 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.09■□□□□ 0.81
NEK3P51956 AC133681.1-201ENST00000465482 601 ntBASIC20.09■□□□□ 0.81
NEK3P51956 AC008550.1-201ENST00000511500 884 ntBASIC20.09■□□□□ 0.81
NEK3P51956 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.09■□□□□ 0.81
NEK3P51956 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
NEK3P51956 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
NEK3P51956 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.09■□□□□ 0.81
NEK3P51956 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.09■□□□□ 0.81
NEK3P51956 AC124016.1-201ENST00000609552 612 ntBASIC20.09■□□□□ 0.81
NEK3P51956 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK3P51956 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK3P51956 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK3P51956 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NEK3P51956 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK3P51956 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK3P51956 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NEK3P51956 TNXA-203ENST00000507684 2038 ntBASIC20.09■□□□□ 0.81
NEK3P51956 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEK3P51956 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NEK3P51956 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NEK3P51956 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
NEK3P51956 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NEK3P51956 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.08■□□□□ 0.81
NEK3P51956 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.08■□□□□ 0.81
NEK3P51956 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.08■□□□□ 0.81
NEK3P51956 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NEK3P51956 RPS2P4-201ENST00000476944 856 ntBASIC20.08■□□□□ 0.81
NEK3P51956 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.08■□□□□ 0.81
NEK3P51956 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NEK3P51956 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.08■□□□□ 0.81
NEK3P51956 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.08■□□□□ 0.81
NEK3P51956 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.08■□□□□ 0.81
NEK3P51956 AL121829.2-201ENST00000620908 328 ntBASIC20.08■□□□□ 0.81
NEK3P51956 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NEK3P51956 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
NEK3P51956 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.08■□□□□ 0.8
NEK3P51956 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.08■□□□□ 0.8
NEK3P51956 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NEK3P51956 KRT8P17-201ENST00000453110 1448 ntBASIC20.08■□□□□ 0.8
NEK3P51956 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NEK3P51956 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NEK3P51956 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NEK3P51956 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NEK3P51956 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.07■□□□□ 0.8
NEK3P51956 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NEK3P51956 AC124283.5-201ENST00000624661 1809 ntBASIC20.07■□□□□ 0.8
NEK3P51956 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 KRASP1-201ENST00000407852 552 ntBASIC20.07■□□□□ 0.8
NEK3P51956 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NEK3P51956 AL121906.2-201ENST00000621597 723 ntBASIC20.07■□□□□ 0.8
NEK3P51956 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NEK3P51956 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEK3P51956 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NEK3P51956 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.07■□□□□ 0.8
NEK3P51956 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.06■□□□□ 0.8
NEK3P51956 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms