Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCNKAP51800 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CLCNKAP51800 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCNKAP51800 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCNKAP51800 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.14■□□□□ 0.65
CLCNKAP51800 FAM197Y1-201ENST00000421178 764 ntBASIC19.14■□□□□ 0.65
CLCNKAP51800 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCNKAP51800 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.14■□□□□ 0.65
CLCNKAP51800 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CLCNKAP51800 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.14■□□□□ 0.65
CLCNKAP51800 AC026471.5-201ENST00000615068 467 ntBASIC19.14■□□□□ 0.65
CLCNKAP51800 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.14■□□□□ 0.65
CLCNKAP51800 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCNKAP51800 KRT16P1-201ENST00000399124 1418 ntBASIC19.14■□□□□ 0.65
CLCNKAP51800 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCNKAP51800 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLCNKAP51800 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCNKAP51800 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCNKAP51800 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCNKAP51800 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCNKAP51800 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCNKAP51800 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CLCNKAP51800 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CLCNKAP51800 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
CLCNKAP51800 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCNKAP51800 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCNKAP51800 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCNKAP51800 NUDT16P1-203ENST00000513809 620 ntBASIC19.13■□□□□ 0.65
CLCNKAP51800 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLCNKAP51800 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCNKAP51800 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCNKAP51800 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCNKAP51800 KRT8P8-201ENST00000434750 1448 ntBASIC19.13■□□□□ 0.65
CLCNKAP51800 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCNKAP51800 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLCNKAP51800 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCNKAP51800 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCNKAP51800 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLCNKAP51800 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCNKAP51800 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCNKAP51800 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCNKAP51800 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CLCNKAP51800 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCNKAP51800 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCNKAP51800 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLCNKAP51800 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.12■□□□□ 0.65
CLCNKAP51800 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.12■□□□□ 0.65
CLCNKAP51800 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLCNKAP51800 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCNKAP51800 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.12■□□□□ 0.65
CLCNKAP51800 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
CLCNKAP51800 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CLCNKAP51800 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCNKAP51800 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 AL355355.2-201ENST00000442321 338 ntBASIC19.12■□□□□ 0.65
CLCNKAP51800 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.12■□□□□ 0.65
CLCNKAP51800 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.12■□□□□ 0.65
CLCNKAP51800 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.12■□□□□ 0.65
CLCNKAP51800 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLCNKAP51800 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCNKAP51800 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CLCNKAP51800 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLCNKAP51800 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCNKAP51800 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCNKAP51800 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.12■□□□□ 0.65
CLCNKAP51800 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CLCNKAP51800 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCNKAP51800 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCNKAP51800 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CLCNKAP51800 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCNKAP51800 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.11■□□□□ 0.65
CLCNKAP51800 AC116562.2-201ENST00000507042 360 ntBASIC19.11■□□□□ 0.65
CLCNKAP51800 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCNKAP51800 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.11■□□□□ 0.65
CLCNKAP51800 AC026271.3-201ENST00000571884 352 ntBASIC19.11■□□□□ 0.65
CLCNKAP51800 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms