Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.53■□□□□ 0.56
GABRA4P48169 Z85996.1-201ENST00000494644 937 ntBASIC18.53■□□□□ 0.56
GABRA4P48169 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.53■□□□□ 0.56
GABRA4P48169 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.53■□□□□ 0.56
GABRA4P48169 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.53■□□□□ 0.56
GABRA4P48169 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.53■□□□□ 0.56
GABRA4P48169 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 AP000525.1-201ENST00000608286 694 ntBASIC18.53■□□□□ 0.56
GABRA4P48169 AC012306.2-201ENST00000609350 630 ntBASIC18.53■□□□□ 0.56
GABRA4P48169 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GABRA4P48169 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.52■□□□□ 0.56
GABRA4P48169 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.52■□□□□ 0.56
GABRA4P48169 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.52■□□□□ 0.56
GABRA4P48169 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.52■□□□□ 0.56
GABRA4P48169 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
GABRA4P48169 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
GABRA4P48169 KRT8P9-201ENST00000558927 1449 ntBASIC18.52■□□□□ 0.56
GABRA4P48169 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GABRA4P48169 MMP23A-201ENST00000234610 1017 ntBASIC18.52■□□□□ 0.56
GABRA4P48169 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GABRA4P48169 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.52■□□□□ 0.56
GABRA4P48169 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GABRA4P48169 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.52■□□□□ 0.56
GABRA4P48169 AC008040.2-201ENST00000461049 708 ntBASIC18.52■□□□□ 0.56
GABRA4P48169 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
GABRA4P48169 AC130371.2-201ENST00000619443 611 ntBASIC18.52■□□□□ 0.56
GABRA4P48169 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
GABRA4P48169 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
GABRA4P48169 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GABRA4P48169 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.52■□□□□ 0.56
GABRA4P48169 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
GABRA4P48169 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GABRA4P48169 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
GABRA4P48169 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GABRA4P48169 RCC2P6-201ENST00000526625 1557 ntBASIC18.51■□□□□ 0.55
GABRA4P48169 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GABRA4P48169 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABRA4P48169 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABRA4P48169 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABRA4P48169 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABRA4P48169 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.51■□□□□ 0.55
GABRA4P48169 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GABRA4P48169 ECEL1P3-201ENST00000427961 737 ntBASIC18.51■□□□□ 0.55
GABRA4P48169 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABRA4P48169 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.51■□□□□ 0.55
GABRA4P48169 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GABRA4P48169 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GABRA4P48169 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.51■□□□□ 0.55
GABRA4P48169 FITM1-202ENST00000559294 800 ntBASIC18.51■□□□□ 0.55
GABRA4P48169 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.51■□□□□ 0.55
GABRA4P48169 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.51■□□□□ 0.55
GABRA4P48169 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.51■□□□□ 0.55
GABRA4P48169 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.51■□□□□ 0.55
GABRA4P48169 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GABRA4P48169 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.51■□□□□ 0.55
GABRA4P48169 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GABRA4P48169 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABRA4P48169 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GABRA4P48169 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.51■□□□□ 0.55
GABRA4P48169 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABRA4P48169 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GABRA4P48169 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
GABRA4P48169 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GABRA4P48169 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GABRA4P48169 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
GABRA4P48169 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GABRA4P48169 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
GABRA4P48169 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
GABRA4P48169 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GABRA4P48169 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
GABRA4P48169 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GABRA4P48169 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
GABRA4P48169 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.5■□□□□ 0.55
GABRA4P48169 AC097493.4-201ENST00000641197 219 ntBASIC18.5■□□□□ 0.55
GABRA4P48169 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.5■□□□□ 0.55
GABRA4P48169 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GABRA4P48169 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GABRA4P48169 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
GABRA4P48169 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.5■□□□□ 0.55
GABRA4P48169 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
GABRA4P48169 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
GABRA4P48169 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GABRA4P48169 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GABRA4P48169 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.5■□□□□ 0.55
GABRA4P48169 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.49■□□□□ 0.55
GABRA4P48169 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GABRA4P48169 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.49■□□□□ 0.55
GABRA4P48169 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABRA4P48169 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABRA4P48169 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
GABRA4P48169 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
GABRA4P48169 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms