Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CBX5P45973 AC008406.3-201ENST00000620001 1374 ntBASIC16.77■□□□□ 0.27
CBX5P45973 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.76■□□□□ 0.27
CBX5P45973 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.76■□□□□ 0.27
CBX5P45973 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.76■□□□□ 0.27
CBX5P45973 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.76■□□□□ 0.27
CBX5P45973 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.76■□□□□ 0.27
CBX5P45973 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.76■□□□□ 0.27
CBX5P45973 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.76■□□□□ 0.27
CBX5P45973 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.76■□□□□ 0.27
CBX5P45973 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CBX5P45973 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CBX5P45973 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CBX5P45973 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CBX5P45973 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CBX5P45973 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.75■□□□□ 0.27
CBX5P45973 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.75■□□□□ 0.27
CBX5P45973 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.75■□□□□ 0.27
CBX5P45973 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CBX5P45973 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.75■□□□□ 0.27
CBX5P45973 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CBX5P45973 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CBX5P45973 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 LINC02228-203ENST00000641970 1355 ntBASIC16.75■□□□□ 0.27
CBX5P45973 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CBX5P45973 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.75■□□□□ 0.27
CBX5P45973 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CBX5P45973 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 AC093503.3-201ENST00000624917 2352 ntBASIC16.74■□□□□ 0.27
CBX5P45973 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.74■□□□□ 0.27
CBX5P45973 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.74■□□□□ 0.27
CBX5P45973 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.74■□□□□ 0.27
CBX5P45973 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.74■□□□□ 0.27
CBX5P45973 KRT8P17-201ENST00000453110 1448 ntBASIC16.74■□□□□ 0.27
CBX5P45973 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.74■□□□□ 0.27
CBX5P45973 AC027612.3-201ENST00000413684 1047 ntBASIC16.74■□□□□ 0.27
CBX5P45973 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.74■□□□□ 0.27
CBX5P45973 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.74■□□□□ 0.27
CBX5P45973 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CBX5P45973 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.74■□□□□ 0.27
CBX5P45973 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.74■□□□□ 0.27
CBX5P45973 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CBX5P45973 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.74■□□□□ 0.27
CBX5P45973 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.74■□□□□ 0.27
CBX5P45973 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CBX5P45973 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CBX5P45973 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CBX5P45973 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
CBX5P45973 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX5P45973 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CBX5P45973 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CBX5P45973 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.73■□□□□ 0.27
CBX5P45973 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX5P45973 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms