Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 AL023875.1-201ENST00000640777 796 ntBASIC19.69■□□□□ 0.74
CHRNA4P43681 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.69■□□□□ 0.74
CHRNA4P43681 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA4P43681 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.69■□□□□ 0.74
CHRNA4P43681 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHRNA4P43681 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CHRNA4P43681 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHRNA4P43681 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRNA4P43681 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRNA4P43681 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRNA4P43681 AC128676.1-201ENST00000454392 318 ntBASIC19.68■□□□□ 0.74
CHRNA4P43681 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRNA4P43681 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.68■□□□□ 0.74
CHRNA4P43681 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRNA4P43681 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CHRNA4P43681 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CHRNA4P43681 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA4P43681 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.67■□□□□ 0.74
CHRNA4P43681 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHRNA4P43681 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CHRNA4P43681 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CHRNA4P43681 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CHRNA4P43681 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.67■□□□□ 0.74
CHRNA4P43681 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.67■□□□□ 0.74
CHRNA4P43681 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 KRT18P16-201ENST00000510337 1294 ntBASIC19.67■□□□□ 0.74
CHRNA4P43681 PRKY-204ENST00000533551 1019 ntBASIC19.67■□□□□ 0.74
CHRNA4P43681 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 AC005332.7-201ENST00000614046 2005 ntBASIC19.67■□□□□ 0.74
CHRNA4P43681 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CHRNA4P43681 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA4P43681 NBPF21P-201ENST00000425093 1451 ntBASIC19.67■□□□□ 0.74
CHRNA4P43681 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CHRNA4P43681 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNA4P43681 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.66■□□□□ 0.74
CHRNA4P43681 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA4P43681 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA4P43681 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA4P43681 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA4P43681 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA4P43681 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CHRNA4P43681 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNA4P43681 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNA4P43681 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA4P43681 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA4P43681 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNA4P43681 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNA4P43681 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA4P43681 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNA4P43681 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CHRNA4P43681 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 KRASP1-201ENST00000407852 552 ntBASIC19.65■□□□□ 0.74
CHRNA4P43681 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNA4P43681 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNA4P43681 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNA4P43681 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.65■□□□□ 0.74
CHRNA4P43681 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.65■□□□□ 0.74
CHRNA4P43681 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CHRNA4P43681 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNA4P43681 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.65■□□□□ 0.74
CHRNA4P43681 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms