Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFC5P40937 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC5P40937 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFC5P40937 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC5P40937 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.55■■□□□ 1.04
RFC5P40937 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.55■■□□□ 1.04
RFC5P40937 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFC5P40937 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFC5P40937 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.55■■□□□ 1.04
RFC5P40937 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.55■■□□□ 1.04
RFC5P40937 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.55■■□□□ 1.04
RFC5P40937 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC5P40937 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.55■■□□□ 1.04
RFC5P40937 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RFC5P40937 FSCN1P1-201ENST00000568912 1481 ntBASIC21.55■■□□□ 1.04
RFC5P40937 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.55■■□□□ 1.04
RFC5P40937 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC5P40937 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFC5P40937 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.55■■□□□ 1.04
RFC5P40937 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFC5P40937 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFC5P40937 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RFC5P40937 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 AC112907.3-201ENST00000577781 2400 ntBASIC21.54■■□□□ 1.04
RFC5P40937 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RFC5P40937 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RFC5P40937 RBM17P1-201ENST00000453646 1190 ntBASIC21.54■■□□□ 1.04
RFC5P40937 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.54■■□□□ 1.04
RFC5P40937 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.54■■□□□ 1.04
RFC5P40937 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.54■■□□□ 1.04
RFC5P40937 MIR6786-201ENST00000616843 113 ntBASIC21.54■■□□□ 1.04
RFC5P40937 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.54■■□□□ 1.04
RFC5P40937 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
RFC5P40937 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC5P40937 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC5P40937 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC5P40937 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC5P40937 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC5P40937 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC5P40937 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RFC5P40937 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.53■■□□□ 1.04
RFC5P40937 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RFC5P40937 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC5P40937 UNC93B2-201ENST00000285383 730 ntBASIC21.53■■□□□ 1.04
RFC5P40937 MESTP1-201ENST00000404287 994 ntBASIC21.53■■□□□ 1.04
RFC5P40937 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC5P40937 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC5P40937 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
RFC5P40937 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC5P40937 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.53■■□□□ 1.04
RFC5P40937 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC5P40937 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC5P40937 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
RFC5P40937 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC5P40937 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC5P40937 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC5P40937 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC5P40937 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC5P40937 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.52■■□□□ 1.04
RFC5P40937 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC5P40937 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.52■■□□□ 1.04
RFC5P40937 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC5P40937 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC5P40937 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFC5P40937 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.52■■□□□ 1.04
RFC5P40937 B3GAT3P1-201ENST00000471720 806 ntBASIC21.52■■□□□ 1.04
RFC5P40937 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.52■■□□□ 1.04
RFC5P40937 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.52■■□□□ 1.04
RFC5P40937 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC5P40937 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.52■■□□□ 1.04
RFC5P40937 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC5P40937 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
RFC5P40937 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFC5P40937 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.52■■□□□ 1.04
RFC5P40937 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.52■■□□□ 1.04
RFC5P40937 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
RFC5P40937 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RFC5P40937 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
RFC5P40937 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC5P40937 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
RFC5P40937 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RFC5P40937 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFC5P40937 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RFC5P40937 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC5P40937 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms