Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.7■□□□□ 0.74
RPA3P35244 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.7■□□□□ 0.74
RPA3P35244 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.7■□□□□ 0.74
RPA3P35244 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPA3P35244 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPA3P35244 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.7■□□□□ 0.74
RPA3P35244 AP001271.2-201ENST00000624018 1556 ntBASIC19.7■□□□□ 0.74
RPA3P35244 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.7■□□□□ 0.74
RPA3P35244 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RPA3P35244 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPA3P35244 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.69■□□□□ 0.74
RPA3P35244 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RPA3P35244 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPA3P35244 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPA3P35244 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
RPA3P35244 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPA3P35244 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPA3P35244 LSM12P1-201ENST00000411836 588 ntBASIC19.69■□□□□ 0.74
RPA3P35244 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.69■□□□□ 0.74
RPA3P35244 TSPY6P-201ENST00000448518 926 ntBASIC19.69■□□□□ 0.74
RPA3P35244 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RPA3P35244 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.69■□□□□ 0.74
RPA3P35244 AL589743.5-201ENST00000616611 1050 ntBASIC19.69■□□□□ 0.74
RPA3P35244 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPA3P35244 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPA3P35244 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPA3P35244 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPA3P35244 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
RPA3P35244 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RPA3P35244 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPA3P35244 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPA3P35244 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPA3P35244 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
RPA3P35244 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.68■□□□□ 0.74
RPA3P35244 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPA3P35244 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RPA3P35244 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RPA3P35244 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPA3P35244 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.68■□□□□ 0.74
RPA3P35244 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.68■□□□□ 0.74
RPA3P35244 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.68■□□□□ 0.74
RPA3P35244 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.68■□□□□ 0.74
RPA3P35244 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.68■□□□□ 0.74
RPA3P35244 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPA3P35244 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPA3P35244 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.68■□□□□ 0.74
RPA3P35244 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RPA3P35244 KRT16P6-202ENST00000425692 1426 ntBASIC19.68■□□□□ 0.74
RPA3P35244 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPA3P35244 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPA3P35244 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPA3P35244 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPA3P35244 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.67■□□□□ 0.74
RPA3P35244 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPA3P35244 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPA3P35244 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPA3P35244 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RPA3P35244 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RPA3P35244 AC105020.6-201ENST00000621523 1217 ntBASIC19.67■□□□□ 0.74
RPA3P35244 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPA3P35244 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
RPA3P35244 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPA3P35244 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RPA3P35244 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPA3P35244 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPA3P35244 AC005082.1-201ENST00000413042 2259 ntBASIC19.67■□□□□ 0.74
RPA3P35244 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.67■□□□□ 0.74
RPA3P35244 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.66■□□□□ 0.74
RPA3P35244 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPA3P35244 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.66■□□□□ 0.74
RPA3P35244 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RPA3P35244 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPA3P35244 ID1-201ENST00000376105 1233 ntBASIC19.66■□□□□ 0.74
RPA3P35244 MIPEPP3-201ENST00000412105 444 ntBASIC19.66■□□□□ 0.74
RPA3P35244 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPA3P35244 GUSBP6-202ENST00000438529 1198 ntBASIC19.66■□□□□ 0.74
RPA3P35244 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.66■□□□□ 0.74
RPA3P35244 AC104771.1-201ENST00000603335 964 ntBASIC19.66■□□□□ 0.74
RPA3P35244 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPA3P35244 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPA3P35244 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPA3P35244 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPA3P35244 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RPA3P35244 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPA3P35244 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPA3P35244 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RPA3P35244 KRT17P1-201ENST00000399211 1546 ntBASIC19.66■□□□□ 0.74
RPA3P35244 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.66■□□□□ 0.74
RPA3P35244 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RPA3P35244 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPA3P35244 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RPA3P35244 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.65■□□□□ 0.74
RPA3P35244 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RPA3P35244 HLA-L-209ENST00000420110 1011 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms