Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA3P32297 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA3P32297 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRNA3P32297 AC026366.1-201ENST00000488803 879 ntBASIC20.54■□□□□ 0.88
CHRNA3P32297 AP003097.1-201ENST00000530657 1135 ntBASIC20.54■□□□□ 0.88
CHRNA3P32297 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.54■□□□□ 0.88
CHRNA3P32297 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHRNA3P32297 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CHRNA3P32297 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CHRNA3P32297 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA3P32297 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNA3P32297 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNA3P32297 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA3P32297 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRNA3P32297 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRNA3P32297 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.53■□□□□ 0.88
CHRNA3P32297 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHRNA3P32297 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.53■□□□□ 0.88
CHRNA3P32297 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRNA3P32297 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CHRNA3P32297 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA3P32297 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHRNA3P32297 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHRNA3P32297 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRNA3P32297 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRNA3P32297 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.52■□□□□ 0.88
CHRNA3P32297 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
CHRNA3P32297 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.52■□□□□ 0.88
CHRNA3P32297 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRNA3P32297 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.52■□□□□ 0.88
CHRNA3P32297 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRNA3P32297 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CHRNA3P32297 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CHRNA3P32297 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRNA3P32297 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA3P32297 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHRNA3P32297 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRNA3P32297 AC093503.3-201ENST00000624917 2352 ntBASIC20.51■□□□□ 0.87
CHRNA3P32297 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHRNA3P32297 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHRNA3P32297 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRNA3P32297 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRNA3P32297 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRNA3P32297 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.51■□□□□ 0.87
CHRNA3P32297 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CHRNA3P32297 AC006058.3-201ENST00000606217 1069 ntBASIC20.51■□□□□ 0.87
CHRNA3P32297 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRNA3P32297 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.51■□□□□ 0.87
CHRNA3P32297 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNA3P32297 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CHRNA3P32297 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNA3P32297 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.5■□□□□ 0.87
CHRNA3P32297 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNA3P32297 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNA3P32297 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNA3P32297 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CHRNA3P32297 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNA3P32297 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.5■□□□□ 0.87
CHRNA3P32297 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNA3P32297 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.5■□□□□ 0.87
CHRNA3P32297 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CHRNA3P32297 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms