Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.07■□□□□ 0.8
SLC6A4P31645 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A4P31645 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A4P31645 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A4P31645 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A4P31645 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A4P31645 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A4P31645 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC6A4P31645 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A4P31645 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC6A4P31645 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC6A4P31645 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
SLC6A4P31645 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC6A4P31645 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 LINC01465-201ENST00000408887 1940 ntBASIC20.06■□□□□ 0.8
SLC6A4P31645 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC6A4P31645 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SLC6A4P31645 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SLC6A4P31645 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
SLC6A4P31645 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC6A4P31645 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 MESTP1-201ENST00000404287 994 ntBASIC20.06■□□□□ 0.8
SLC6A4P31645 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC6A4P31645 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC6A4P31645 AC116562.2-201ENST00000507042 360 ntBASIC20.06■□□□□ 0.8
SLC6A4P31645 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.06■□□□□ 0.8
SLC6A4P31645 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC6A4P31645 BX088651.1-201ENST00000540551 451 ntBASIC20.06■□□□□ 0.8
SLC6A4P31645 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC6A4P31645 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SLC6A4P31645 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A4P31645 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A4P31645 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A4P31645 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SLC6A4P31645 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A4P31645 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A4P31645 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC6A4P31645 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC6A4P31645 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.05■□□□□ 0.8
SLC6A4P31645 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A4P31645 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC6A4P31645 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC6A4P31645 AL031985.4-201ENST00000642138 673 ntBASIC20.05■□□□□ 0.8
SLC6A4P31645 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC6A4P31645 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A4P31645 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC6A4P31645 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC6A4P31645 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLC6A4P31645 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A4P31645 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 RBM17P1-201ENST00000453646 1190 ntBASIC20.04■□□□□ 0.8
SLC6A4P31645 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A4P31645 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A4P31645 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLC6A4P31645 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC6A4P31645 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 AC125437.2-201ENST00000625180 2167 ntBASIC20.04■□□□□ 0.8
SLC6A4P31645 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC6A4P31645 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A4P31645 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A4P31645 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A4P31645 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SLC6A4P31645 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A4P31645 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A4P31645 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC6A4P31645 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLC6A4P31645 AC011506.1-201ENST00000474329 610 ntBASIC20.03■□□□□ 0.8
SLC6A4P31645 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC6A4P31645 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC6A4P31645 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC6A4P31645 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC6A4P31645 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC6A4P31645 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC6A4P31645 AC131212.4-201ENST00000623606 975 ntBASIC20.03■□□□□ 0.8
SLC6A4P31645 AC073912.3-201ENST00000624414 853 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms