Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
VARSP26640 MIR718-201ENST00000390190 70 ntBASIC19.13■□□□□ 0.65
VARSP26640 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VARSP26640 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.13■□□□□ 0.65
VARSP26640 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VARSP26640 HLA-B-256ENST00000639848 1089 ntBASIC19.13■□□□□ 0.65
VARSP26640 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARSP26640 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.13■□□□□ 0.65
VARSP26640 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VARSP26640 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARSP26640 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.13■□□□□ 0.65
VARSP26640 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
VARSP26640 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARSP26640 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.12■□□□□ 0.65
VARSP26640 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.12■□□□□ 0.65
VARSP26640 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.12■□□□□ 0.65
VARSP26640 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.12■□□□□ 0.65
VARSP26640 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.12■□□□□ 0.65
VARSP26640 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.12■□□□□ 0.65
VARSP26640 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
VARSP26640 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.12■□□□□ 0.65
VARSP26640 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.12■□□□□ 0.65
VARSP26640 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 UNC93B5-201ENST00000530315 699 ntBASIC19.12■□□□□ 0.65
VARSP26640 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.12■□□□□ 0.65
VARSP26640 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
VARSP26640 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.12■□□□□ 0.65
VARSP26640 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARSP26640 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.11■□□□□ 0.65
VARSP26640 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARSP26640 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
VARSP26640 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARSP26640 PHGDH-210ENST00000641115 1638 ntBASIC19.11■□□□□ 0.65
VARSP26640 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARSP26640 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARSP26640 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.11■□□□□ 0.65
VARSP26640 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VARSP26640 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARSP26640 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.11■□□□□ 0.65
VARSP26640 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.11■□□□□ 0.65
VARSP26640 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VARSP26640 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.11■□□□□ 0.65
VARSP26640 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.11■□□□□ 0.65
VARSP26640 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.11■□□□□ 0.65
VARSP26640 UNC93B4-201ENST00000505679 747 ntBASIC19.11■□□□□ 0.65
VARSP26640 AP003097.1-201ENST00000530657 1135 ntBASIC19.11■□□□□ 0.65
VARSP26640 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.11■□□□□ 0.65
VARSP26640 PNMA6B-201ENST00000538162 1200 ntBASIC19.11■□□□□ 0.65
VARSP26640 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARSP26640 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARSP26640 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VARSP26640 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.11■□□□□ 0.65
VARSP26640 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARSP26640 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
VARSP26640 TREX1-205ENST00000625293 1783 ntBASIC19.11■□□□□ 0.65
VARSP26640 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARSP26640 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.1■□□□□ 0.65
VARSP26640 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VARSP26640 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VARSP26640 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 AC124283.5-201ENST00000624661 1809 ntBASIC19.1■□□□□ 0.65
VARSP26640 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
VARSP26640 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.1■□□□□ 0.65
VARSP26640 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.1■□□□□ 0.65
VARSP26640 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.1■□□□□ 0.65
VARSP26640 AC060766.5-201ENST00000590539 871 ntBASIC19.1■□□□□ 0.65
VARSP26640 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
VARSP26640 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
VARSP26640 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARSP26640 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
VARSP26640 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
VARSP26640 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.1■□□□□ 0.65
VARSP26640 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.1■□□□□ 0.65
VARSP26640 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms