Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CD53P19397 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD53P19397 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD53P19397 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD53P19397 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD53P19397 ECEL1P3-201ENST00000427961 737 ntBASIC17.68■□□□□ 0.42
CD53P19397 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.68■□□□□ 0.42
CD53P19397 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.68■□□□□ 0.42
CD53P19397 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.68■□□□□ 0.42
CD53P19397 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD53P19397 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.68■□□□□ 0.42
CD53P19397 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.68■□□□□ 0.42
CD53P19397 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD53P19397 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CD53P19397 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.68■□□□□ 0.42
CD53P19397 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CD53P19397 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.68■□□□□ 0.42
CD53P19397 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.68■□□□□ 0.42
CD53P19397 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD53P19397 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.68■□□□□ 0.42
CD53P19397 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD53P19397 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD53P19397 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD53P19397 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.67■□□□□ 0.42
CD53P19397 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CD53P19397 AC009237.14-201ENST00000609975 1594 ntBASIC17.67■□□□□ 0.42
CD53P19397 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD53P19397 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD53P19397 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD53P19397 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD53P19397 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.67■□□□□ 0.42
CD53P19397 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CD53P19397 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.67■□□□□ 0.42
CD53P19397 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD53P19397 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD53P19397 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD53P19397 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.67■□□□□ 0.42
CD53P19397 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CD53P19397 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD53P19397 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.67■□□□□ 0.42
CD53P19397 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CD53P19397 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.66■□□□□ 0.42
CD53P19397 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CD53P19397 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.66■□□□□ 0.42
CD53P19397 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CD53P19397 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CD53P19397 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CD53P19397 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 KRT18P68-201ENST00000392293 1000 ntBASIC17.66■□□□□ 0.42
CD53P19397 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.66■□□□□ 0.42
CD53P19397 SNORA78-201ENST00000459373 127 ntBASIC17.66■□□□□ 0.42
CD53P19397 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.66■□□□□ 0.42
CD53P19397 AC233263.1-201ENST00000578059 224 ntBASIC17.66■□□□□ 0.42
CD53P19397 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.66■□□□□ 0.42
CD53P19397 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.66■□□□□ 0.42
CD53P19397 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.66■□□□□ 0.42
CD53P19397 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.66■□□□□ 0.42
CD53P19397 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CD53P19397 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.66■□□□□ 0.42
CD53P19397 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CD53P19397 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.66■□□□□ 0.42
CD53P19397 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD53P19397 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CD53P19397 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.65■□□□□ 0.42
CD53P19397 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.65■□□□□ 0.42
CD53P19397 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CD53P19397 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.65■□□□□ 0.42
CD53P19397 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.65■□□□□ 0.42
CD53P19397 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.65■□□□□ 0.42
CD53P19397 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CD53P19397 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD53P19397 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.65■□□□□ 0.42
CD53P19397 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms