Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PRORSD1P-201ENST00000295112 541 ntBASIC19.58■□□□□ 0.72
VCLP18206 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.58■□□□□ 0.72
VCLP18206 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.58■□□□□ 0.72
VCLP18206 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.58■□□□□ 0.72
VCLP18206 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VCLP18206 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.58■□□□□ 0.72
VCLP18206 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.58■□□□□ 0.72
VCLP18206 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.58■□□□□ 0.72
VCLP18206 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.58■□□□□ 0.72
VCLP18206 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCLP18206 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCLP18206 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCLP18206 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCLP18206 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCLP18206 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.58■□□□□ 0.72
VCLP18206 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.58■□□□□ 0.72
VCLP18206 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
VCLP18206 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCLP18206 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCLP18206 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
VCLP18206 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.57■□□□□ 0.72
VCLP18206 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
VCLP18206 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
VCLP18206 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
VCLP18206 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.57■□□□□ 0.72
VCLP18206 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.57■□□□□ 0.72
VCLP18206 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.57■□□□□ 0.72
VCLP18206 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 AL121906.2-201ENST00000621597 723 ntBASIC19.57■□□□□ 0.72
VCLP18206 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
VCLP18206 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
VCLP18206 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 AL691432.2-201ENST00000607222 2038 ntBASIC19.57■□□□□ 0.72
VCLP18206 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.57■□□□□ 0.72
VCLP18206 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VCLP18206 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VCLP18206 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VCLP18206 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VCLP18206 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VCLP18206 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
VCLP18206 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.56■□□□□ 0.72
VCLP18206 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.56■□□□□ 0.72
VCLP18206 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.56■□□□□ 0.72
VCLP18206 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.56■□□□□ 0.72
VCLP18206 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VCLP18206 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.56■□□□□ 0.72
VCLP18206 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VCLP18206 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VCLP18206 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.56■□□□□ 0.72
VCLP18206 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VCLP18206 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VCLP18206 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.55■□□□□ 0.72
VCLP18206 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VCLP18206 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VCLP18206 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
VCLP18206 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.55■□□□□ 0.72
VCLP18206 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
VCLP18206 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 RN7SL471P-201ENST00000580476 299 ntBASIC19.55■□□□□ 0.72
VCLP18206 LETM1P2-201ENST00000597330 2178 ntBASIC19.55■□□□□ 0.72
VCLP18206 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.55■□□□□ 0.72
VCLP18206 AL121829.2-201ENST00000620908 328 ntBASIC19.55■□□□□ 0.72
VCLP18206 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VCLP18206 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.55■□□□□ 0.72
VCLP18206 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VCLP18206 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms