Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PPP3CBP16298 RPS2P55-201ENST00000397318 883 ntBASIC17.48■□□□□ 0.39
PPP3CBP16298 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
PPP3CBP16298 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.48■□□□□ 0.39
PPP3CBP16298 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.48■□□□□ 0.39
PPP3CBP16298 AC107956.1-201ENST00000494359 873 ntBASIC17.48■□□□□ 0.39
PPP3CBP16298 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.48■□□□□ 0.39
PPP3CBP16298 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.48■□□□□ 0.39
PPP3CBP16298 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PPP3CBP16298 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.48■□□□□ 0.39
PPP3CBP16298 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.48■□□□□ 0.39
PPP3CBP16298 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PPP3CBP16298 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PPP3CBP16298 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
PPP3CBP16298 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.47■□□□□ 0.39
PPP3CBP16298 KRT8P20-201ENST00000423953 1409 ntBASIC17.47■□□□□ 0.39
PPP3CBP16298 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.47■□□□□ 0.39
PPP3CBP16298 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.47■□□□□ 0.39
PPP3CBP16298 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.47■□□□□ 0.39
PPP3CBP16298 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.47■□□□□ 0.39
PPP3CBP16298 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.47■□□□□ 0.39
PPP3CBP16298 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.47■□□□□ 0.39
PPP3CBP16298 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PPP3CBP16298 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PPP3CBP16298 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PPP3CBP16298 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PPP3CBP16298 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PPP3CBP16298 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
PPP3CBP16298 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PPP3CBP16298 KRT17P2-201ENST00000300992 1314 ntBASIC17.47■□□□□ 0.39
PPP3CBP16298 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.47■□□□□ 0.39
PPP3CBP16298 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PPP3CBP16298 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PPP3CBP16298 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 PLK5-205ENST00000642079 1969 ntBASIC17.46■□□□□ 0.39
PPP3CBP16298 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PPP3CBP16298 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.46■□□□□ 0.39
PPP3CBP16298 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.46■□□□□ 0.39
PPP3CBP16298 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.46■□□□□ 0.39
PPP3CBP16298 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.46■□□□□ 0.39
PPP3CBP16298 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.46■□□□□ 0.39
PPP3CBP16298 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.46■□□□□ 0.39
PPP3CBP16298 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 AL031963.3-201ENST00000606441 850 ntBASIC17.46■□□□□ 0.39
PPP3CBP16298 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.46■□□□□ 0.39
PPP3CBP16298 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PPP3CBP16298 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PPP3CBP16298 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PPP3CBP16298 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
PPP3CBP16298 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPP3CBP16298 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPP3CBP16298 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
PPP3CBP16298 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPP3CBP16298 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.45■□□□□ 0.38
PPP3CBP16298 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PPP3CBP16298 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.45■□□□□ 0.38
PPP3CBP16298 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PPP3CBP16298 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PPP3CBP16298 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPP3CBP16298 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.45■□□□□ 0.38
PPP3CBP16298 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.45■□□□□ 0.38
PPP3CBP16298 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.45■□□□□ 0.38
PPP3CBP16298 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PPP3CBP16298 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PPP3CBP16298 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PPP3CBP16298 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.45■□□□□ 0.38
PPP3CBP16298 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms