Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
KRT3P12035 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT3P12035 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
KRT3P12035 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 YBX1P10-201ENST00000444752 975 ntBASIC20.55■□□□□ 0.88
KRT3P12035 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT3P12035 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.55■□□□□ 0.88
KRT3P12035 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT3P12035 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.55■□□□□ 0.88
KRT3P12035 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.55■□□□□ 0.88
KRT3P12035 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.55■□□□□ 0.88
KRT3P12035 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.55■□□□□ 0.88
KRT3P12035 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT3P12035 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT3P12035 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT3P12035 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT3P12035 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT3P12035 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT3P12035 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KRT3P12035 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
KRT3P12035 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT3P12035 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.54■□□□□ 0.88
KRT3P12035 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KRT3P12035 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT3P12035 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
KRT3P12035 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
KRT3P12035 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT3P12035 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT3P12035 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT3P12035 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
KRT3P12035 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT3P12035 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT3P12035 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
KRT3P12035 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT3P12035 KRT17P3-201ENST00000420566 1262 ntBASIC20.53■□□□□ 0.88
KRT3P12035 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT3P12035 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT3P12035 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT3P12035 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT3P12035 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT3P12035 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT3P12035 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT3P12035 AC005332.7-201ENST00000614046 2005 ntBASIC20.53■□□□□ 0.88
KRT3P12035 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT3P12035 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT3P12035 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT3P12035 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT3P12035 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
KRT3P12035 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT3P12035 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
KRT3P12035 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.52■□□□□ 0.88
KRT3P12035 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT3P12035 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
KRT3P12035 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
KRT3P12035 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT3P12035 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT3P12035 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
KRT3P12035 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
KRT3P12035 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.52■□□□□ 0.88
KRT3P12035 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT3P12035 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT3P12035 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT3P12035 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT3P12035 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms