Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 LINC01465-201ENST00000408887 1940 ntBASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 AC133561.1-201ENST00000568600 2415 ntBASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CSB-PGBD3P0DP91 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC25.89■■□□□ 1.74
CSB-PGBD3P0DP91 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CSB-PGBD3P0DP91 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CSB-PGBD3P0DP91 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CSB-PGBD3P0DP91 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CSB-PGBD3P0DP91 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CSB-PGBD3P0DP91 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC25.89■■□□□ 1.74
CSB-PGBD3P0DP91 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
CSB-PGBD3P0DP91 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CSB-PGBD3P0DP91 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
CSB-PGBD3P0DP91 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 DUSP5P1-201ENST00000441325 1139 ntBASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 AC005332.1-201ENST00000577698 1310 ntBASIC25.88■■□□□ 1.73
CSB-PGBD3P0DP91 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 HCG4P8-203ENST00000443049 980 ntBASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 CA15P1-201ENST00000481698 905 ntBASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 AP003041.3-201ENST00000527151 707 ntBASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 ETFA-216ENST00000560726 942 ntTSL 3 BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.87■■□□□ 1.73
CSB-PGBD3P0DP91 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 KRT18P38-201ENST00000449496 1282 ntBASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CSB-PGBD3P0DP91 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms