Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSBP07858 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSBP07858 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTSBP07858 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.54■□□□□ 0.56
CTSBP07858 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTSBP07858 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTSBP07858 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSBP07858 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.53■□□□□ 0.56
CTSBP07858 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSBP07858 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.53■□□□□ 0.56
CTSBP07858 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSBP07858 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTSBP07858 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSBP07858 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTSBP07858 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSBP07858 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSBP07858 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.53■□□□□ 0.56
CTSBP07858 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.53■□□□□ 0.56
CTSBP07858 AFG3L1P-217ENST00000557444 2447 ntBASIC18.53■□□□□ 0.56
CTSBP07858 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.53■□□□□ 0.56
CTSBP07858 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.53■□□□□ 0.56
CTSBP07858 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CTSBP07858 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CTSBP07858 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSBP07858 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSBP07858 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.52■□□□□ 0.56
CTSBP07858 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSBP07858 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.52■□□□□ 0.56
CTSBP07858 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
CTSBP07858 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSBP07858 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTSBP07858 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.52■□□□□ 0.56
CTSBP07858 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSBP07858 AL031985.4-201ENST00000642138 673 ntBASIC18.52■□□□□ 0.56
CTSBP07858 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CTSBP07858 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.52■□□□□ 0.55
CTSBP07858 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CTSBP07858 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.52■□□□□ 0.55
CTSBP07858 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.51■□□□□ 0.55
CTSBP07858 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.51■□□□□ 0.55
CTSBP07858 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSBP07858 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSBP07858 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CTSBP07858 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSBP07858 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.51■□□□□ 0.55
CTSBP07858 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.51■□□□□ 0.55
CTSBP07858 B3GAT3P1-201ENST00000471720 806 ntBASIC18.51■□□□□ 0.55
CTSBP07858 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.51■□□□□ 0.55
CTSBP07858 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.51■□□□□ 0.55
CTSBP07858 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.51■□□□□ 0.55
CTSBP07858 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.51■□□□□ 0.55
CTSBP07858 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTSBP07858 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.51■□□□□ 0.55
CTSBP07858 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CTSBP07858 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTSBP07858 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.51■□□□□ 0.55
CTSBP07858 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSBP07858 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
CTSBP07858 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTSBP07858 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTSBP07858 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.5■□□□□ 0.55
CTSBP07858 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CTSBP07858 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CTSBP07858 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CTSBP07858 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CTSBP07858 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.5■□□□□ 0.55
CTSBP07858 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.5■□□□□ 0.55
CTSBP07858 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSBP07858 MIR6786-201ENST00000616843 113 ntBASIC18.5■□□□□ 0.55
CTSBP07858 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.5■□□□□ 0.55
CTSBP07858 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSBP07858 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSBP07858 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.49■□□□□ 0.55
CTSBP07858 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSBP07858 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CTSBP07858 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSBP07858 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSBP07858 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSBP07858 MIR1238-201ENST00000408483 83 ntBASIC18.49■□□□□ 0.55
CTSBP07858 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.49■□□□□ 0.55
CTSBP07858 Z85996.1-201ENST00000494644 937 ntBASIC18.49■□□□□ 0.55
CTSBP07858 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.49■□□□□ 0.55
CTSBP07858 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.49■□□□□ 0.55
CTSBP07858 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms