Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPN1P07384 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPN1P07384 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN1P07384 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN1P07384 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CAPN1P07384 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CAPN1P07384 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPN1P07384 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.16■□□□□ 0.66
CAPN1P07384 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.16■□□□□ 0.66
CAPN1P07384 AC069544.1-201ENST00000609399 999 ntBASIC19.16■□□□□ 0.66
CAPN1P07384 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN1P07384 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CAPN1P07384 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN1P07384 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CAPN1P07384 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CAPN1P07384 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CAPN1P07384 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.15■□□□□ 0.66
CAPN1P07384 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPN1P07384 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.15■□□□□ 0.66
CAPN1P07384 PHGDH-210ENST00000641115 1638 ntBASIC19.15■□□□□ 0.66
CAPN1P07384 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPN1P07384 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 POM121L13P-201ENST00000422362 380 ntBASIC19.15■□□□□ 0.66
CAPN1P07384 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.15■□□□□ 0.66
CAPN1P07384 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.15■□□□□ 0.66
CAPN1P07384 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 RPPH1-201ENST00000516869 333 ntBASIC19.15■□□□□ 0.66
CAPN1P07384 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPN1P07384 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CAPN1P07384 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CAPN1P07384 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.15■□□□□ 0.66
CAPN1P07384 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.15■□□□□ 0.66
CAPN1P07384 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPN1P07384 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CAPN1P07384 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN1P07384 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CAPN1P07384 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CAPN1P07384 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.14■□□□□ 0.66
CAPN1P07384 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CAPN1P07384 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CAPN1P07384 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CAPN1P07384 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.14■□□□□ 0.65
CAPN1P07384 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.14■□□□□ 0.65
CAPN1P07384 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.14■□□□□ 0.65
CAPN1P07384 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.14■□□□□ 0.65
CAPN1P07384 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.14■□□□□ 0.65
CAPN1P07384 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.14■□□□□ 0.65
CAPN1P07384 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.14■□□□□ 0.65
CAPN1P07384 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.14■□□□□ 0.65
CAPN1P07384 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.14■□□□□ 0.65
CAPN1P07384 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.14■□□□□ 0.65
CAPN1P07384 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.14■□□□□ 0.65
CAPN1P07384 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.14■□□□□ 0.65
CAPN1P07384 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CAPN1P07384 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.14■□□□□ 0.65
CAPN1P07384 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN1P07384 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN1P07384 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN1P07384 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN1P07384 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.13■□□□□ 0.65
CAPN1P07384 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN1P07384 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CAPN1P07384 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN1P07384 AL596275.1-201ENST00000423464 877 ntBASIC19.13■□□□□ 0.65
CAPN1P07384 UBE2SP1-201ENST00000450587 669 ntBASIC19.13■□□□□ 0.65
CAPN1P07384 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms