Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.84■□□□□ 0.45
P04436 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
P04436 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.84■□□□□ 0.45
P04436 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
P04436 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
P04436 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
P04436 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
P04436 LINC01521-201ENST00000504184 1943 ntBASIC17.84■□□□□ 0.45
P04436 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
P04436 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
P04436 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
P04436 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
P04436 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
P04436 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
P04436 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
P04436 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.83■□□□□ 0.45
P04436 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.83■□□□□ 0.45
P04436 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.83■□□□□ 0.45
P04436 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
P04436 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
P04436 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
P04436 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
P04436 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.83■□□□□ 0.44
P04436 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
P04436 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.83■□□□□ 0.44
P04436 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
P04436 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
P04436 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.83■□□□□ 0.44
P04436 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
P04436 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
P04436 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.83■□□□□ 0.44
P04436 REXO1L12P-201ENST00000622156 912 ntBASIC17.83■□□□□ 0.44
P04436 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
P04436 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
P04436 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.83■□□□□ 0.44
P04436 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
P04436 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
P04436 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
P04436 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
P04436 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
P04436 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
P04436 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
P04436 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.82■□□□□ 0.44
P04436 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.82■□□□□ 0.44
P04436 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
P04436 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.82■□□□□ 0.44
P04436 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
P04436 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.82■□□□□ 0.44
P04436 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04436 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.82■□□□□ 0.44
P04436 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
P04436 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.81■□□□□ 0.44
P04436 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.81■□□□□ 0.44
P04436 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
P04436 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 UNC93B2-201ENST00000285383 730 ntBASIC17.81■□□□□ 0.44
P04436 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 AC026271.3-201ENST00000571884 352 ntBASIC17.81■□□□□ 0.44
P04436 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
P04436 REXO1L10P-201ENST00000615707 1290 ntBASIC17.81■□□□□ 0.44
P04436 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.81■□□□□ 0.44
P04436 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
P04436 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
P04436 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04436 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.8■□□□□ 0.44
P04436 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04436 TCF3P1-201ENST00000423021 1937 ntBASIC17.8■□□□□ 0.44
P04436 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.8■□□□□ 0.44
P04436 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.8■□□□□ 0.44
P04436 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P04436 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P04436 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.8■□□□□ 0.44
P04436 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04436 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.8■□□□□ 0.44
P04436 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms