Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CD74P04233 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.4■□□□□ 0.22
CD74P04233 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CD74P04233 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CD74P04233 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.4■□□□□ 0.22
CD74P04233 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.4■□□□□ 0.22
CD74P04233 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CD74P04233 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.4■□□□□ 0.22
CD74P04233 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.4■□□□□ 0.22
CD74P04233 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.4■□□□□ 0.22
CD74P04233 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.4■□□□□ 0.22
CD74P04233 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 FP475955.4-201ENST00000623131 1990 ntBASIC16.4■□□□□ 0.22
CD74P04233 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.4■□□□□ 0.22
CD74P04233 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 AL133373.2-201ENST00000623187 2828 ntBASIC16.4■□□□□ 0.22
CD74P04233 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD74P04233 LINC02228-203ENST00000641970 1355 ntBASIC16.39■□□□□ 0.21
CD74P04233 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.39■□□□□ 0.21
CD74P04233 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.39■□□□□ 0.21
CD74P04233 AC018470.1-201ENST00000624790 3129 ntBASIC16.39■□□□□ 0.21
CD74P04233 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.39■□□□□ 0.21
CD74P04233 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CD74P04233 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CD74P04233 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CD74P04233 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.39■□□□□ 0.21
CD74P04233 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CD74P04233 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD74P04233 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.38■□□□□ 0.21
CD74P04233 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.38■□□□□ 0.21
CD74P04233 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.38■□□□□ 0.21
CD74P04233 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CD74P04233 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.38■□□□□ 0.21
CD74P04233 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CD74P04233 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CD74P04233 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.38■□□□□ 0.21
CD74P04233 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CD74P04233 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.38■□□□□ 0.21
CD74P04233 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CD74P04233 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CD74P04233 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD74P04233 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CD74P04233 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.38■□□□□ 0.21
CD74P04233 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CD74P04233 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.37■□□□□ 0.21
CD74P04233 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD74P04233 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.37■□□□□ 0.21
CD74P04233 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CD74P04233 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CD74P04233 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CD74P04233 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD74P04233 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.37■□□□□ 0.21
CD74P04233 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD74P04233 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CD74P04233 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms