Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFAP04085 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFAP04085 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFAP04085 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PDGFAP04085 HLA-G-202ENST00000376815 851 ntBASIC18.22■□□□□ 0.51
PDGFAP04085 HLA-G-203ENST00000376818 1127 ntBASIC18.22■□□□□ 0.51
PDGFAP04085 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.22■□□□□ 0.51
PDGFAP04085 MESTP1-201ENST00000404287 994 ntBASIC18.22■□□□□ 0.51
PDGFAP04085 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFAP04085 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.22■□□□□ 0.51
PDGFAP04085 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
PDGFAP04085 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.22■□□□□ 0.51
PDGFAP04085 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PDGFAP04085 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.22■□□□□ 0.51
PDGFAP04085 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.22■□□□□ 0.51
PDGFAP04085 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFAP04085 AC244015.2-201ENST00000616358 1861 ntBASIC18.22■□□□□ 0.51
PDGFAP04085 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.22■□□□□ 0.51
PDGFAP04085 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFAP04085 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.51
PDGFAP04085 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFAP04085 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFAP04085 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.21■□□□□ 0.51
PDGFAP04085 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.21■□□□□ 0.51
PDGFAP04085 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.21■□□□□ 0.51
PDGFAP04085 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PDGFAP04085 WWOX-216ENST00000569818 525 ntBASIC18.21■□□□□ 0.51
PDGFAP04085 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDGFAP04085 AC006011.2-201ENST00000621313 1158 ntBASIC18.21■□□□□ 0.51
PDGFAP04085 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDGFAP04085 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.21■□□□□ 0.51
PDGFAP04085 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFAP04085 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFAP04085 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.21■□□□□ 0.51
PDGFAP04085 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.21■□□□□ 0.51
PDGFAP04085 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.21■□□□□ 0.51
PDGFAP04085 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.21■□□□□ 0.51
PDGFAP04085 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PDGFAP04085 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
PDGFAP04085 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PDGFAP04085 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 Z98882.1-201ENST00000622160 2253 ntBASIC18.2■□□□□ 0.5
PDGFAP04085 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDGFAP04085 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.2■□□□□ 0.5
PDGFAP04085 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.2■□□□□ 0.5
PDGFAP04085 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.2■□□□□ 0.5
PDGFAP04085 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
PDGFAP04085 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.2■□□□□ 0.5
PDGFAP04085 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDGFAP04085 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDGFAP04085 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PDGFAP04085 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.2■□□□□ 0.5
PDGFAP04085 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.2■□□□□ 0.5
PDGFAP04085 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDGFAP04085 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFAP04085 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.19■□□□□ 0.5
PDGFAP04085 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
PDGFAP04085 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.19■□□□□ 0.5
PDGFAP04085 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
PDGFAP04085 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.19■□□□□ 0.5
PDGFAP04085 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.19■□□□□ 0.5
PDGFAP04085 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.19■□□□□ 0.5
PDGFAP04085 AC087388.1-201ENST00000571370 1112 ntBASIC18.19■□□□□ 0.5
PDGFAP04085 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.19■□□□□ 0.5
PDGFAP04085 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.19■□□□□ 0.5
PDGFAP04085 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFAP04085 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
PDGFAP04085 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 LETM1P2-201ENST00000597330 2178 ntBASIC18.18■□□□□ 0.5
PDGFAP04085 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.18■□□□□ 0.5
PDGFAP04085 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.18■□□□□ 0.5
PDGFAP04085 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFAP04085 AC121338.2-201ENST00000622535 1744 ntBASIC18.18■□□□□ 0.5
PDGFAP04085 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.18■□□□□ 0.5
PDGFAP04085 KRT8P20-201ENST00000423953 1409 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms