Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 KRT16P6-202ENST00000425692 1426 ntBASIC21.55■■□□□ 1.04
CLSTN1O94985 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.55■■□□□ 1.04
CLSTN1O94985 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.55■■□□□ 1.04
CLSTN1O94985 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.55■■□□□ 1.04
CLSTN1O94985 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.55■■□□□ 1.04
CLSTN1O94985 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CLSTN1O94985 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.55■■□□□ 1.04
CLSTN1O94985 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.55■■□□□ 1.04
CLSTN1O94985 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.55■■□□□ 1.04
CLSTN1O94985 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.55■■□□□ 1.04
CLSTN1O94985 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLSTN1O94985 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.54■■□□□ 1.04
CLSTN1O94985 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CLSTN1O94985 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
CLSTN1O94985 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CLSTN1O94985 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.54■■□□□ 1.04
CLSTN1O94985 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.54■■□□□ 1.04
CLSTN1O94985 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.54■■□□□ 1.04
CLSTN1O94985 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CLSTN1O94985 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.54■■□□□ 1.04
CLSTN1O94985 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.54■■□□□ 1.04
CLSTN1O94985 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.54■■□□□ 1.04
CLSTN1O94985 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CLSTN1O94985 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.54■■□□□ 1.04
CLSTN1O94985 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CLSTN1O94985 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
CLSTN1O94985 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CLSTN1O94985 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.54■■□□□ 1.04
CLSTN1O94985 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLSTN1O94985 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.53■■□□□ 1.04
CLSTN1O94985 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CLSTN1O94985 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.53■■□□□ 1.04
CLSTN1O94985 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.53■■□□□ 1.04
CLSTN1O94985 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CLSTN1O94985 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.53■■□□□ 1.04
CLSTN1O94985 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.53■■□□□ 1.04
CLSTN1O94985 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.53■■□□□ 1.04
CLSTN1O94985 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.53■■□□□ 1.04
CLSTN1O94985 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.53■■□□□ 1.04
CLSTN1O94985 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CLSTN1O94985 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CLSTN1O94985 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CLSTN1O94985 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
CLSTN1O94985 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CLSTN1O94985 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLSTN1O94985 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLSTN1O94985 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.52■■□□□ 1.04
CLSTN1O94985 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.52■■□□□ 1.04
CLSTN1O94985 PTBP1P-201ENST00000554374 1601 ntBASIC21.52■■□□□ 1.04
CLSTN1O94985 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CLSTN1O94985 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLSTN1O94985 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLSTN1O94985 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLSTN1O94985 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLSTN1O94985 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.52■■□□□ 1.04
CLSTN1O94985 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLSTN1O94985 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLSTN1O94985 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.52■■□□□ 1.04
CLSTN1O94985 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.52■■□□□ 1.04
CLSTN1O94985 AC099778.1-201ENST00000568593 1911 ntBASIC21.52■■□□□ 1.04
CLSTN1O94985 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CLSTN1O94985 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLSTN1O94985 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms