Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GPC4O75487 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
GPC4O75487 BX323043.1-201ENST00000641006 1765 ntBASIC19.52■□□□□ 0.71
GPC4O75487 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.52■□□□□ 0.71
GPC4O75487 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GPC4O75487 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC4O75487 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
GPC4O75487 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
GPC4O75487 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
GPC4O75487 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
GPC4O75487 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC4O75487 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
GPC4O75487 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC4O75487 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.51■□□□□ 0.71
GPC4O75487 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.51■□□□□ 0.71
GPC4O75487 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
GPC4O75487 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC4O75487 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC4O75487 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
GPC4O75487 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC4O75487 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC4O75487 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.5■□□□□ 0.71
GPC4O75487 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
GPC4O75487 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.5■□□□□ 0.71
GPC4O75487 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
GPC4O75487 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.5■□□□□ 0.71
GPC4O75487 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC4O75487 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GPC4O75487 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GPC4O75487 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.49■□□□□ 0.71
GPC4O75487 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
GPC4O75487 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.49■□□□□ 0.71
GPC4O75487 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GPC4O75487 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.49■□□□□ 0.71
GPC4O75487 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.49■□□□□ 0.71
GPC4O75487 UNC93B4-201ENST00000505679 747 ntBASIC19.49■□□□□ 0.71
GPC4O75487 RNA5SP413-201ENST00000516373 109 ntBASIC19.49■□□□□ 0.71
GPC4O75487 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GPC4O75487 SOX15-203ENST00000570788 1093 ntBASIC19.49■□□□□ 0.71
GPC4O75487 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.49■□□□□ 0.71
GPC4O75487 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.49■□□□□ 0.71
GPC4O75487 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.49■□□□□ 0.71
GPC4O75487 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.49■□□□□ 0.71
GPC4O75487 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
GPC4O75487 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GPC4O75487 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.49■□□□□ 0.71
GPC4O75487 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GPC4O75487 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.49■□□□□ 0.71
GPC4O75487 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GPC4O75487 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.49■□□□□ 0.71
GPC4O75487 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC4O75487 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC4O75487 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC4O75487 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.48■□□□□ 0.71
GPC4O75487 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC4O75487 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC4O75487 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC4O75487 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC4O75487 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.48■□□□□ 0.71
GPC4O75487 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.48■□□□□ 0.71
GPC4O75487 AC120498.8-201ENST00000614275 531 ntBASIC19.48■□□□□ 0.71
GPC4O75487 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC4O75487 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC4O75487 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.48■□□□□ 0.71
GPC4O75487 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC4O75487 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.48■□□□□ 0.71
GPC4O75487 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms