Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
PTCD1O75127 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.07■■□□□ 1.6
PTCD1O75127 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PTCD1O75127 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
PTCD1O75127 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PTCD1O75127 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PTCD1O75127 MOK-225ENST00000522867 1883 ntTSL 5 BASIC25.07■■□□□ 1.6
PTCD1O75127 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.07■■□□□ 1.6
PTCD1O75127 AL160286.2-201ENST00000567150 934 ntBASIC25.07■■□□□ 1.6
PTCD1O75127 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.07■■□□□ 1.6
PTCD1O75127 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.07■■□□□ 1.6
PTCD1O75127 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PTCD1O75127 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
PTCD1O75127 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
PTCD1O75127 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PTCD1O75127 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.06■■□□□ 1.6
PTCD1O75127 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
PTCD1O75127 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.06■■□□□ 1.6
PTCD1O75127 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD1O75127 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
PTCD1O75127 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.05■■□□□ 1.6
PTCD1O75127 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PTCD1O75127 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PTCD1O75127 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
PTCD1O75127 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC25.05■■□□□ 1.6
PTCD1O75127 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PTCD1O75127 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.05■■□□□ 1.6
PTCD1O75127 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PTCD1O75127 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC25.05■■□□□ 1.6
PTCD1O75127 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PTCD1O75127 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC25.05■■□□□ 1.6
PTCD1O75127 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC25.05■■□□□ 1.6
PTCD1O75127 AC092647.4-201ENST00000457211 535 ntBASIC25.05■■□□□ 1.6
PTCD1O75127 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
PTCD1O75127 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PTCD1O75127 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.05■■□□□ 1.6
PTCD1O75127 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
PTCD1O75127 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PTCD1O75127 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.05■■□□□ 1.6
PTCD1O75127 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25.05■■□□□ 1.6
PTCD1O75127 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PTCD1O75127 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PTCD1O75127 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PTCD1O75127 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PTCD1O75127 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PTCD1O75127 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PTCD1O75127 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
PTCD1O75127 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PTCD1O75127 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PTCD1O75127 TSPY17P-201ENST00000450329 467 ntBASIC25.04■■□□□ 1.6
PTCD1O75127 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC25.04■■□□□ 1.6
PTCD1O75127 AL353719.1-201ENST00000566847 864 ntBASIC25.04■■□□□ 1.6
PTCD1O75127 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
PTCD1O75127 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PTCD1O75127 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
PTCD1O75127 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PTCD1O75127 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.04■■□□□ 1.6
PTCD1O75127 FEM1AP1-201ENST00000431297 1995 ntBASIC25.04■■□□□ 1.6
PTCD1O75127 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PTCD1O75127 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
PTCD1O75127 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PTCD1O75127 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PTCD1O75127 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PTCD1O75127 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PTCD1O75127 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PTCD1O75127 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC25.03■■□□□ 1.6
PTCD1O75127 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PTCD1O75127 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PTCD1O75127 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.03■■□□□ 1.6
PTCD1O75127 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC25.03■■□□□ 1.6
PTCD1O75127 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PTCD1O75127 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PTCD1O75127 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PTCD1O75127 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.03■■□□□ 1.6
PTCD1O75127 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
PTCD1O75127 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.02■■□□□ 1.6
PTCD1O75127 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD1O75127 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.02■■□□□ 1.6
PTCD1O75127 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD1O75127 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC25.02■■□□□ 1.6
PTCD1O75127 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC25.02■■□□□ 1.6
PTCD1O75127 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC25.02■■□□□ 1.6
PTCD1O75127 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD1O75127 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD1O75127 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD1O75127 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD1O75127 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.02■■□□□ 1.6
PTCD1O75127 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms