Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA12O60330 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
PCDHGA12O60330 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA12O60330 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
PCDHGA12O60330 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHGA12O60330 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA12O60330 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PCDHGA12O60330 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHGA12O60330 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
PCDHGA12O60330 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA12O60330 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA12O60330 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA12O60330 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA12O60330 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHGA12O60330 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
PCDHGA12O60330 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHGA12O60330 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHGA12O60330 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA12O60330 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA12O60330 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA12O60330 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA12O60330 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHGA12O60330 EGLN1P1-201ENST00000531623 762 ntBASIC19.33■□□□□ 0.68
PCDHGA12O60330 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHGA12O60330 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHGA12O60330 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA12O60330 PLK5-205ENST00000642079 1969 ntBASIC19.33■□□□□ 0.68
PCDHGA12O60330 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHGA12O60330 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PCDHGA12O60330 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA12O60330 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA12O60330 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA12O60330 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA12O60330 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA12O60330 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PCDHGA12O60330 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA12O60330 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGA12O60330 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA12O60330 TSPY14P-201ENST00000303979 915 ntBASIC19.32■□□□□ 0.68
PCDHGA12O60330 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA12O60330 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGA12O60330 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA12O60330 NTF6B-201ENST00000591913 560 ntBASIC19.32■□□□□ 0.68
PCDHGA12O60330 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA12O60330 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA12O60330 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PCDHGA12O60330 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA12O60330 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA12O60330 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA12O60330 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHGA12O60330 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA12O60330 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGA12O60330 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA12O60330 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA12O60330 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 GABARAPL3-202ENST00000624044 1851 ntBASIC19.31■□□□□ 0.68
PCDHGA12O60330 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA12O60330 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA12O60330 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA12O60330 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA12O60330 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA12O60330 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 LIN28AP1-201ENST00000429574 405 ntBASIC19.31■□□□□ 0.68
PCDHGA12O60330 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA12O60330 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA12O60330 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA12O60330 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA12O60330 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 AP005212.1-201ENST00000581547 1997 ntBASIC19.3■□□□□ 0.68
PCDHGA12O60330 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.3■□□□□ 0.68
PCDHGA12O60330 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA12O60330 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 B3GAT3P1-201ENST00000471720 806 ntBASIC19.3■□□□□ 0.68
PCDHGA12O60330 AC010203.1-204ENST00000548782 407 ntBASIC19.3■□□□□ 0.68
PCDHGA12O60330 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA12O60330 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA12O60330 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA12O60330 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms