Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC33.53■■■□□ 2.96
CUX2O14529 MIR3197-201ENST00000582241 73 ntBASIC33.53■■■□□ 2.96
CUX2O14529 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC33.53■■■□□ 2.96
CUX2O14529 HLA-A-209ENST00000638375 975 ntBASIC33.53■■■□□ 2.96
CUX2O14529 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC33.53■■■□□ 2.96
CUX2O14529 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
CUX2O14529 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC33.53■■■□□ 2.96
CUX2O14529 PARN-205ENST00000539279 1557 ntTSL 2 BASIC33.53■■■□□ 2.96
CUX2O14529 STK25-204ENST00000405585 1643 ntTSL 2 BASIC33.52■■■□□ 2.96
CUX2O14529 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC33.52■■■□□ 2.96
CUX2O14529 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
CUX2O14529 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC33.52■■■□□ 2.96
CUX2O14529 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC33.52■■■□□ 2.96
CUX2O14529 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC33.52■■■□□ 2.96
CUX2O14529 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC33.52■■■□□ 2.96
CUX2O14529 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
CUX2O14529 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
CUX2O14529 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
CUX2O14529 STAC-204ENST00000457375 1366 ntTSL 2 BASIC33.52■■■□□ 2.96
CUX2O14529 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC33.52■■■□□ 2.96
CUX2O14529 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
CUX2O14529 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC33.51■■■□□ 2.96
CUX2O14529 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
CUX2O14529 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
CUX2O14529 HLA-G-202ENST00000376815 851 ntBASIC33.51■■■□□ 2.96
CUX2O14529 POLD2P1-201ENST00000511220 997 ntBASIC33.51■■■□□ 2.96
CUX2O14529 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC33.51■■■□□ 2.96
CUX2O14529 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
CUX2O14529 AP001005.1-201ENST00000571755 1248 ntBASIC33.51■■■□□ 2.96
CUX2O14529 IL11-204ENST00000590625 1028 ntTSL 2 BASIC33.51■■■□□ 2.96
CUX2O14529 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
CUX2O14529 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
CUX2O14529 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC33.51■■■□□ 2.96
CUX2O14529 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
CUX2O14529 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC33.51■■■□□ 2.96
CUX2O14529 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
CUX2O14529 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC33.51■■■□□ 2.95
CUX2O14529 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CUX2O14529 TLE1-202ENST00000376484 666 ntTSL 3 BASIC33.5■■■□□ 2.95
CUX2O14529 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CUX2O14529 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC33.5■■■□□ 2.95
CUX2O14529 DRAXINP1-201ENST00000437611 948 ntBASIC33.5■■■□□ 2.95
CUX2O14529 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
CUX2O14529 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC33.5■■■□□ 2.95
CUX2O14529 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CUX2O14529 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC33.5■■■□□ 2.95
CUX2O14529 PNN-202ENST00000553331 656 ntTSL 3 BASIC33.5■■■□□ 2.95
CUX2O14529 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC33.5■■■□□ 2.95
CUX2O14529 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC33.5■■■□□ 2.95
CUX2O14529 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC33.5■■■□□ 2.95
CUX2O14529 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC33.5■■■□□ 2.95
CUX2O14529 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC33.5■■■□□ 2.95
CUX2O14529 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
CUX2O14529 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC33.5■■■□□ 2.95
CUX2O14529 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
CUX2O14529 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC33.5■■■□□ 2.95
CUX2O14529 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
CUX2O14529 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC33.5■■■□□ 2.95
CUX2O14529 FOSL1P1-201ENST00000511041 816 ntBASIC33.5■■■□□ 2.95
CUX2O14529 KRT8P26-201ENST00000534154 1276 ntBASIC33.5■■■□□ 2.95
CUX2O14529 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
CUX2O14529 WDR6-223ENST00000627177 207 ntTSL 2 BASIC33.5■■■□□ 2.95
CUX2O14529 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC33.49■■■□□ 2.95
CUX2O14529 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
CUX2O14529 PMS2P7-201ENST00000506558 1336 ntBASIC33.49■■■□□ 2.95
CUX2O14529 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
CUX2O14529 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC33.49■■■□□ 2.95
CUX2O14529 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
CUX2O14529 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC33.49■■■□□ 2.95
CUX2O14529 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC33.49■■■□□ 2.95
CUX2O14529 CIB2-208ENST00000560618 804 ntTSL 2 BASIC33.49■■■□□ 2.95
CUX2O14529 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC33.49■■■□□ 2.95
CUX2O14529 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC33.49■■■□□ 2.95
CUX2O14529 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC33.49■■■□□ 2.95
CUX2O14529 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC33.48■■■□□ 2.95
CUX2O14529 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC33.48■■■□□ 2.95
CUX2O14529 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC33.48■■■□□ 2.95
CUX2O14529 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
CUX2O14529 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC33.48■■■□□ 2.95
CUX2O14529 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
CUX2O14529 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
CUX2O14529 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC33.48■■■□□ 2.95
CUX2O14529 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC33.48■■■□□ 2.95
CUX2O14529 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
CUX2O14529 Z85996.1-201ENST00000494644 937 ntBASIC33.48■■■□□ 2.95
CUX2O14529 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC33.48■■■□□ 2.95
CUX2O14529 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC33.48■■■□□ 2.95
CUX2O14529 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC33.48■■■□□ 2.95
CUX2O14529 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC33.47■■■□□ 2.95
CUX2O14529 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
CUX2O14529 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC33.47■■■□□ 2.95
CUX2O14529 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC33.47■■■□□ 2.95
CUX2O14529 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC33.47■■■□□ 2.95
CUX2O14529 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC33.47■■■□□ 2.95
CUX2O14529 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
CUX2O14529 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
CUX2O14529 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
CUX2O14529 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
CUX2O14529 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC33.46■■■□□ 2.95
CUX2O14529 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC33.46■■■□□ 2.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms