Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
EIF3FO00303 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
EIF3FO00303 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.1■□□□□ 0.65
EIF3FO00303 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EIF3FO00303 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
EIF3FO00303 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
EIF3FO00303 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EIF3FO00303 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EIF3FO00303 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EIF3FO00303 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EIF3FO00303 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EIF3FO00303 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
EIF3FO00303 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EIF3FO00303 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
EIF3FO00303 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
EIF3FO00303 AC005332.7-201ENST00000614046 2005 ntBASIC19.09■□□□□ 0.65
EIF3FO00303 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.09■□□□□ 0.65
EIF3FO00303 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
EIF3FO00303 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
EIF3FO00303 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.09■□□□□ 0.65
EIF3FO00303 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
EIF3FO00303 ESRRAP1-201ENST00000400596 1257 ntBASIC19.09■□□□□ 0.65
EIF3FO00303 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
EIF3FO00303 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
EIF3FO00303 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
EIF3FO00303 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.09■□□□□ 0.65
EIF3FO00303 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
EIF3FO00303 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EIF3FO00303 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
EIF3FO00303 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.09■□□□□ 0.65
EIF3FO00303 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.09■□□□□ 0.65
EIF3FO00303 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
EIF3FO00303 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
EIF3FO00303 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
EIF3FO00303 ZNF815P-204ENST00000434898 1737 ntBASIC19.08■□□□□ 0.65
EIF3FO00303 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
EIF3FO00303 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.08■□□□□ 0.65
EIF3FO00303 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
EIF3FO00303 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.08■□□□□ 0.65
EIF3FO00303 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
EIF3FO00303 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
EIF3FO00303 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.08■□□□□ 0.65
EIF3FO00303 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.08■□□□□ 0.64
EIF3FO00303 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.08■□□□□ 0.64
EIF3FO00303 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
EIF3FO00303 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
EIF3FO00303 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.08■□□□□ 0.64
EIF3FO00303 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
EIF3FO00303 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.08■□□□□ 0.64
EIF3FO00303 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.08■□□□□ 0.64
EIF3FO00303 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
EIF3FO00303 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
EIF3FO00303 NBPF21P-201ENST00000425093 1451 ntBASIC19.08■□□□□ 0.64
EIF3FO00303 AC116562.4-201ENST00000641316 2276 ntBASIC19.08■□□□□ 0.64
EIF3FO00303 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.08■□□□□ 0.64
EIF3FO00303 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
EIF3FO00303 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
EIF3FO00303 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EIF3FO00303 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
EIF3FO00303 Z82202.1-201ENST00000623446 1880 ntBASIC19.07■□□□□ 0.64
EIF3FO00303 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EIF3FO00303 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EIF3FO00303 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.07■□□□□ 0.64
EIF3FO00303 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
EIF3FO00303 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EIF3FO00303 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
EIF3FO00303 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.07■□□□□ 0.64
EIF3FO00303 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
EIF3FO00303 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.07■□□□□ 0.64
EIF3FO00303 AC004264.1-201ENST00000608354 794 ntBASIC19.07■□□□□ 0.64
EIF3FO00303 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.07■□□□□ 0.64
EIF3FO00303 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EIF3FO00303 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EIF3FO00303 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EIF3FO00303 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EIF3FO00303 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
EIF3FO00303 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.06■□□□□ 0.64
EIF3FO00303 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
EIF3FO00303 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
EIF3FO00303 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.06■□□□□ 0.64
EIF3FO00303 CD99P1-205ENST00000527459 561 ntBASIC19.06■□□□□ 0.64
EIF3FO00303 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.06■□□□□ 0.64
EIF3FO00303 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.06■□□□□ 0.64
EIF3FO00303 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.06■□□□□ 0.64
EIF3FO00303 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.06■□□□□ 0.64
EIF3FO00303 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EIF3FO00303 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.06■□□□□ 0.64
EIF3FO00303 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms