Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 AC090340.1-201ENST00000620778 4980 ntBASIC18.03■□□□□ 0.48
TNFRSF11BO00300 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 AC023632.3-201ENST00000521633 145 ntBASIC18.02■□□□□ 0.48
TNFRSF11BO00300 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TNFRSF11BO00300 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNFRSF11BO00300 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TNFRSF11BO00300 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.02■□□□□ 0.47
TNFRSF11BO00300 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TNFRSF11BO00300 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNFRSF11BO00300 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.02■□□□□ 0.47
TNFRSF11BO00300 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TNFRSF11BO00300 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TNFRSF11BO00300 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 KRT18P11-201ENST00000435214 1283 ntBASIC18.01■□□□□ 0.47
TNFRSF11BO00300 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 NTF6G-201ENST00000591094 616 ntBASIC18.01■□□□□ 0.47
TNFRSF11BO00300 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TNFRSF11BO00300 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18■□□□□ 0.47
TNFRSF11BO00300 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18■□□□□ 0.47
TNFRSF11BO00300 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18■□□□□ 0.47
TNFRSF11BO00300 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18■□□□□ 0.47
TNFRSF11BO00300 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 DBI-210ENST00000542275 757 ntTSL 5 BASIC18■□□□□ 0.47
TNFRSF11BO00300 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18■□□□□ 0.47
TNFRSF11BO00300 CYP2T3P-201ENST00000601990 817 ntBASIC18■□□□□ 0.47
TNFRSF11BO00300 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18■□□□□ 0.47
TNFRSF11BO00300 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TNFRSF11BO00300 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18■□□□□ 0.47
TNFRSF11BO00300 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18■□□□□ 0.47
TNFRSF11BO00300 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
TNFRSF11BO00300 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms